Clavelina lepadiformis (light-bulb sea squirt): 143464654
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Entry
143464654 CDS
T11416
Name
(RefSeq) putative RNA-binding protein 19
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clep03009
]
143464654
Ribosome biogenesis [BR:
clep03009
]
Eukaryotic type
90S particles
Other 90S particles
143464654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_7
RRM_occluded
RRM_ACIN1
RBD_DEAH11
RRM_5
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
143464654
NCBI-ProteinID:
XP_076818672
LinkDB
All DBs
Position
7
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AA seq
802 aa
AA seq
DB search
MHCLDAMQSEFNITIIFQAMSRLIVKNLPSKITDDKLREKFSQYGVVTDVKLVFTKSGKF
RRFAFVGYRANEEAENARNNLHKSLLNNQRMIVENCRDFGVQEKAKKLQKENENDEAENE
NNKKLSSRNSDDENIHPKSEISDLEFMKSKTTLSDDEDQLDNVTAENDEPFVRHHIRMRG
CPFNLKEKQVREFFYPLLITRISIQKSEHGNRTGTVFVSFTNKEDVEQSLKHDGDYLSGR
YIELFRVKDKQSPVSLRPSDKPWMKKVVEDHDNCEIEDISETGRLFVRNLSYTCTESDLE
KHFEKFGPLSEVNIPLDNLTHKSVGFGFVTFMMPEHGLKAFNELDGSAFQGRMLHILPAK
AKTEQSESNNPDAKSSFKKNKASVEKKSSQSSHNWNSLFVGTNSVADALSEKYNEDKNVI
LSSTDKHSAAVRVALGETQIIKETRDFLIDNGVSLDAFSQPNAERSKTVIIAKNLSVGAT
SSELREMFEKHARLGRLLLSPSGVTAIVECLEPSEARNAFMKLAYRKFHHKPLYLEWAPM
ETFVEPKPQENKNKVEEVMKDVEADNEQDGASSLTLFVKNLNFETTDEAFRGHFEKCGPL
LSCAISKKKTHKRNILLSMGYGFVTFKNKSDGQKALKTLQNLCLDGHKLELKLSERKKPV
NVGQDRKRQEDKKQVSSKILIRNIPFQANVSEIRSLFKSFGELKSVRLPKKLSADLGQSG
HHRGFAFVDFVTKQDAKSAFETLCHSTHLYGRRLVLEWADSENDTVEGLRRKTSEHYHGD
AKKHKSVNLIEEELTTTPAEVE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcttagatgcaatgcaaagtgagtttaacattactattatttttcaggcaatg
tctcggctaattgttaaaaatttaccttctaagataactgatgataaactccgggagaag
ttttcccagtatggagtcgtcaccgacgtcaaacttgtcttcaccaaatctgggaaattt
cgacgttttgcttttgttggttatcgtgccaacgaggaagctgagaatgcaagaaataat
ttacacaaaagtttgctgaacaatcagcgaatgatcgttgaaaattgtagagacttcggt
gttcaggagaaagcaaaaaaactccaaaaagagaacgaaaatgatgaagctgaaaatgaa
aataacaagaaattgtcttcgagaaacagcgatgatgaaaacattcatccaaagtctgaa
atttccgacttggagttcatgaagagcaaaacgacactgagtgatgatgaagaccaactc
gataatgtgacagctgagaatgatgagccttttgtaagacaccacatccggatgcggggt
tgcccattcaatttgaaggagaagcaagttagagaatttttttaccccctcctcatcacg
cgcatcagcatccagaagagtgagcacggcaacaggacagggaccgtctttgtcagcttt
acaaacaaggaagacgtagaacaatcgctgaagcacgatggcgattacctcagtggaaga
tacatcgagcttttcagagtgaaggacaagcagagtccagttagtttgagaccctcagac
aagccgtggatgaagaaagtcgtcgaagatcatgacaattgcgaaattgaagatatttca
gagacgggtcgactttttgttcgtaatttatcgtacacttgcactgagtcagatttagaa
aaacatttcgaaaaatttggcccattgtcggaagtcaacatccctctggataacttgact
cataaaagtgtcggctttggtttcgtcactttcatgatgccagagcatgggttgaaagca
ttcaatgagctcgatggatcggcatttcaaggtcgcatgctgcatatcctgccagcaaaa
gctaagactgaacaatctgagagcaataatcctgatgccaaatcatctttcaagaagaat
aaggcgtccgtggagaagaagtcatcccagagctctcataattggaactcattgtttgtt
ggaacaaattcagtggctgatgcgctttcagagaaatacaacgaggacaagaacgtgatt
ctctcctccaccgacaagcacagcgcggctgttcgagtggcgctgggggaaacccagatt
attaaagaaacgagagatttcttgattgataacggcgtctccctcgatgctttcagccag
cccaatgcagagagaagcaaaactgtcatcatcgccaagaacttatcggtcggtgccact
tcttccgaactgagggagatgttcgagaaacacgccaggcttggccgattgctgctctct
ccatccggggtgaccgccatagttgagtgcctcgaaccatcggaggcgaggaatgctttc
atgaagctcgcttatcgcaagttccaccacaaacctttataccttgaatgggctcccatg
gaaacttttgtggaaccgaaacctcaagaaaataagaacaaagttgaagaagtgatgaag
gatgttgaagctgacaatgagcaggatggagcatcttcactgacgttgtttgtgaaaaat
ttaaacttcgaaaccacagatgaagctttccgtggccattttgaaaaatgtggtcctctg
ttgtcatgtgccatcagcaagaagaaaacccacaaaagaaacattcttctatctatggga
tatggttttgtgacttttaaaaataaatcagatgggcaaaaagcattaaaaactcttcaa
aatttgtgtttagatggacataaactcgaattgaaattgtctgaacggaaaaaacctgtt
aatgttgggcaagatcgaaaacgacaggaagataagaaacaggtttcctcaaaaatcttg
atacgaaatattccttttcaagcaaatgtgtctgagattagaagtttatttaaatctttc
ggagaacttaagtcagttcgactgccaaaaaaactgagcgctgatctcgggcaaagcggc
catcacagaggtttcgcttttgttgattttgtcacaaagcaggacgcaaaatctgctttc
gagaccttgtgccactcgactcacttgtacgggcgacgacttgtccttgaatgggcagat
tcagaaaatgacactgtggaaggactgagaaggaaaacctcggaacattaccacggagat
gcaaagaagcataaaagcgtgaatttaatcgaagaagaactgacaacgacacctgctgag
gtagaatga
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