Clavelina lepadiformis (light-bulb sea squirt): 143464736
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Entry
143464736 CDS
T11416
Name
(RefSeq) nucleolysin TIAR-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
clep
Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143464736
03041 Spliceosome [BR:
clep03041
]
143464736
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
143464736
Spliceosome [BR:
clep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
143464736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
RRM_7
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
143464736
NCBI-ProteinID:
XP_076818801
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All DBs
Position
7:complement(15143355..15153172)
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AA seq
493 aa
AA seq
DB search
MMNLNDEEAYPKTLYVGNLDPNVSESLILELFNVIGPCKSCKMIAPDIPGGDPYCFVEFF
DHALALAAHGAMNGRKILGKEIRVNWATRPSAKKDTSNHHHIFVGDLSPETTSEDLKNYF
SKVGKVSDARVMRDATTNKSKGYGFVSFINYQDAQDIVEKKTIIQEALHGRQVRCNWAAR
KMGPTAGRTFQKLDYTTVVNQSSPNNCTVYLGGCMSGLTEHLMRETFAGFGNILEIRVFP
DKGYSFIRFDTHNDAAQAITAKHGSQLEGYTIKCSWGKEGAGMPGVTMGTGYTNGMSQPS
MDSMQMTQWSPAGTDMWGQQNQQYNQWTAWRNPAQQQQQQPQQQQQQQQQQSSWNTWAPN
QQNNTWAPNQPNNTWAPNSMTTNSTWAPNNTSQPSMQQNSSWGWPSMGQQGQQQQQQGQQ
QQPQQPQQQAADGWGNSNIQQQQANGDGMWNNWTSQGLGNLTQQNDSHNTNTSMGSGDPG
MNSSSLPTNGFPM
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcttaatgatgaagaagcatatcccaagactctatatgtgggtaacttggat
cccaatgtctcggaatcccttattttggaattgtttaatgtcattggtccttgtaagagc
tgcaagatgatagcaccagatatacctggcggggacccctactgctttgttgagttcttt
gaccatgctttggccctcgctgctcatggagctatgaatggtcgcaagattcttggaaag
gaaatcagagtgaactgggctaccagaccatcagctaaaaaggacaccagcaatcatcat
catatttttgttggagacctctctccagaaacaacatctgaagatctgaagaactacttt
agtaaagtgggaaaagtttctgatgctcgtgttatgagagatgcaactactaataaatcc
aagggttatggttttgtttcattcattaactaccaggatgcacaagacattgtggagaag
aaaactatcatacaggaggcattgcatggtagacaagtgagatgcaattgggctgctcga
aaaatggggccaacggctggtcgaacatttcaaaagttggattataccacggttgtcaac
cagtccagcccaaacaattgcactgtctatcttggtggttgtatgtctggcttgactgag
cacttgatgcgagaaacttttgctggctttggaaatattttagagattcgcgtttttcca
gacaaaggctattcttttataagatttgacactcacaatgatgctgcccaagccatcaca
gcaaaacatggatctcagcttgaaggttacactataaaatgctcgtggggaaaggaagga
gcaggaatgccgggggtaacaatgggtacaggatacaccaatgggatgtcgcaaccttct
atggacagcatgcagatgacacaatggtcacctgctggaactgatatgtggggtcagcag
aaccagcaatacaaccagtggactgcttggagaaatcctgcccaacagcagcagcaacag
cctcaacaacagcaacagcaacaacagcagcaaagttcatggaatacatgggcacccaac
cagcaaaacaacacttgggcacccaatcagccaaacaacacttgggcgcccaattcaatg
acaaccaatagtacatgggcaccaaataacaccagccagccttccatgcagcagaattct
tcgtggggctggccaagtatgggacagcaggggcaacagcagcagcaacaggggcagcaa
caacaaccacaacaaccacagcaacaagcagcagatgggtggggcaatagcaacatacag
caacagcaagcaaatggtgacggaatgtggaacaactggacatcacaaggtcttggaaac
ttgactcaacaaaatgatagccacaacactaacacttccatgggctctggcgatcccgga
atgaattcatctagtttgcctacaaacggctttcctatgtag
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