KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143464939
Entry
143464939         CDS       T11416                                 
Name
(RefSeq) single-strand selective monofunctional uracil DNA glycosylase-like
  KO
K10800  single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    143464939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clep03400]
    143464939
DNA repair and recombination proteins [BR:clep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     143464939
 Prokaryotic type
     143464939
SSDB
Motif
Pfam: UDG DUF7814 RNase_Y_N
Other DBs
NCBI-GeneID: 143464939
NCBI-ProteinID: XP_076819119
LinkDB
Position
7:18842791..18847282
AA seq 418 aa
MDGYFNGAIEKQAIQQHLGPGFNFSSFSNISQTTSTVDQAYSKQTEAGIPQDYFNDEPRW
KDNKQGSSMAFASAYNLYNNNLPGTLIATQQQAATSELDVLPATQLPNQLFSASVQVNRL
MQQNMSTDNTSSSFTSQEQQILSQHQELDSQQEQVILGNDIEEENFNSQLVLAFLWIEAK
LCAQLKCLKFCERVTSIYNPLEYASDPHAHYVSKYCGTKTVLFLGMNPGPFGMAQNGVPF
GDTRYVREWLKISGQVHPPANENSKRPIYGLNCSKSEVSGARFWGFIAKTSGSPEIFFQN
CFVHNYCPLVFMTKTGKNIIPAALPASDRHALEDMCDVALLQCIRVLRCQVVVAIGKYAA
ERAQHVLQTSGDASSASIRVERILHPSPASPQANTGWEEVVTRQLREMGIMHYLQHPG
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggacggttattttaatggagccatagaaaagcaggcaattcagcaacaccttgggcct
gggtttaacttctcctcgttttcaaatatcagtcagacaacatcaactgttgatcaggct
tacagcaaacaaacagaagcaggaataccccaggattatttcaatgatgaaccgagatgg
aaagacaataagcagggttcatcgatggcttttgcatcagcttacaatctgtacaataac
aacttgccaggaaccctaattgccacccagcagcaagctgccacgtctgaattggatgta
ctgccagctacacaattgcctaatcagttgttctctgcctccgtgcaagtcaatcgtctg
atgcagcagaacatgtcaactgataatacttcatcatcatttacgagtcaggagcaacag
atcttgagtcagcatcaggagcttgattcccagcaggaacaggtgatactggggaacgat
atcgaagaggagaacttcaactctcaacttgtcctcgcatttctttggatcgaagcaaag
ttatgtgctcaactcaagtgtttaaagttttgtgagagggtgacttccatctacaatccc
ttggagtatgcatcagatccgcacgctcattatgtcagcaaatactgtgggacgaaaacc
gttctcttccttggaatgaaccctggaccatttggaatggcacagaatggggttccgttc
ggtgatacgcgatatgtccgtgagtggttgaagataagcggccaagtccacccccctgcc
aacgaaaattctaaacgaccaatttatggattaaattgctccaaaagcgaagtcagcggg
gcaagattttggggcttcatagcaaagacaagcggtagccctgaaatttttttccagaac
tgttttgttcacaattattgtccattggtgtttatgaccaagacaggtaaaaacataatc
ccagcagcgttaccagcttcagaccgacatgcgttggaagatatgtgcgatgtcgctctg
ctgcaatgcatacgtgtcttacggtgtcaggttgtggtcgccatcggcaaatatgctgct
gaaagagcacagcatgttctccagacatctggtgatgcgtcatctgccagtattcgtgtc
gagcggatacttcatccatctcccgcatcacctcaggcaaacactggctgggaagaggtg
gtgacgagacaattgcgtgaaatgggaataatgcattacttgcagcatcccggatga

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