Clavelina lepadiformis (light-bulb sea squirt): 143465022
Help
Entry
143465022 CDS
T11416
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
143465022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clep03019
]
143465022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143465022
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
143465022
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143465022
Exosomal proteins of colorectal cancer cells
143465022
Exosomal proteins of bladder cancer cells
143465022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
TRM82_WD
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_WDR41
ASA1
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
Tricorn_2nd
PAC11
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Nup120_160
Beta-prop_ACSF4
MIOS_WD40
Beta-prop_pof12
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
143465022
NCBI-ProteinID:
XP_076819253
LinkDB
All DBs
Position
7:20226195..20230337
Genome browser
AA seq
323 aa
AA seq
DB search
MTQEQMTLRGTLVGHNGWVTKIATTPAIPEMILSASRDKSLIVWKLTRDENTYGVMNRRL
KGHAHFVSDVVISSDGQFALSGSWDHDLRLWNLQQGETTRRFEGHTKDVLSVAFSGDNRQ
IISASRDGTIKLWNTLGQCKYTITEDNHTDWVSCVQFSPNPNTPIIVSCGWDKVVKVWNL
TNCKLKTDHYGHTAFINSVTVSPDGSLCASGGKDGQAMLWDLSEGKHLYTLTNGESEIHA
LAFSPNRYWLCAACGPTIKIWDLEGKALLDELRPELINLNSKAGQPECLSLAWSPDGQTL
FAGYTDNLIRVWQVSILASQSVQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagaacaaatgacattgcgaggaactttggtggggcataatggatgggtcaca
aaaatcgctacgaccccggcaattccagaaatgatcctctctgcttccagggataagtcc
ctcattgtatggaagttgacaagagatgaaaacacgtacggagtgatgaaccgccgtctt
aaaggacacgcccactttgtgtctgatgtcgtgatttcatccgacggtcagtttgcattg
tctggctcatgggaccatgacctaagactctggaaccttcagcagggagagacgacccgt
cgttttgaaggccacaccaaggatgttctttccgtggctttctccggtgacaaccgtcag
atcatctcggcgtcaagggacggtacgatcaagctgtggaacacactcggacagtgcaaa
tataccatcactgaagacaatcacaccgattgggtctcgtgtgtccagttctctccaaac
ccaaacacgccaatcattgtctcgtgcggttgggacaaagtggtcaaggtttggaatttg
accaactgcaagctaaagaccgaccactatggacatactgcgttcatcaactcagtcacc
gtatcaccagatggctccttgtgcgcctctggtggaaaggacggccaggccatgctttgg
gatctcagcgaaggcaagcacctgtacacgttgacgaacggcgagagtgagatccacgcg
ctcgcattctctcccaaccgatactggctgtgcgctgcttgcggaccaaccatcaaaatc
tgggacttggaaggaaaagcgcttctcgatgaactccgaccagaacttattaacctgaac
agcaaggccggacaacctgaatgtctctcgctggcgtggtccccagatggacagactctc
tttgccggctacactgataacttgatcagggtctggcaagtgtcaattttggcgagtcag
tcagtccagtaa
DBGET
integrated database retrieval system
