Clavelina lepadiformis (light-bulb sea squirt): 143465643
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Entry
143465643 CDS
T11416
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143465643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143465643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143465643
Membrane trafficking [BR:
clep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
143465643
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143465643
Exosomal proteins of colorectal cancer cells
143465643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
143465643
NCBI-ProteinID:
XP_076820160
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Position
7:11762049..11768024
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AA seq
385 aa
AA seq
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MDRFVWVTGGIQFNEAIFYTKNAVRIYDGDDKTSYDDGTVKVTTHRIIWTDAKYQIALPM
ELVVYSEKHSGGFGKSPKVSVHLQAPPVNKVPGPVSRSQNSFIKFSFKDGGESEFHNQLQ
AAIQKQGWVQQSISSSSSSLKSAPMGTRTRAAGIVGIERKIEEKQKKTDQNISVAFQDLT
KLMEKAKEMVALSSNIATKIKDKKGDITDDETVKFKSYLLSLGIPNPVTKETHGSGTHYH
MQLAHEVCKSLDKAVGECGGMMLLSDAYCRINRARGMELLSPEDLLNACKMLDNLNLSLK
LRTFATGVAVLQLQSHSDDLIIEQTTQLVEESTSLSAQELANLVNISVLLAKERLLLTES
VGGVCRDDSDEGLRFFPNLFLTKVV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatcggtttgtgtgggtaactggcggaatacaattcaatgaagcaattttttacact
aaaaatgcagtgaggatttatgatggtgatgataagacatcttatgatgacggtacggtt
aaagttacaacccataggataatttggactgatgccaaatatcaaattgctttgccaatg
gaacttgttgtatattcagaaaagcattctggaggttttgggaaaagcccgaaagtatca
gttcatttacaagctcctcccgtcaacaaagttccgggtcctgtttcaaggagtcaaaat
agttttatcaagttttctttcaaggatggaggtgaatctgagttccacaatcaactgcaa
gctgcaattcagaaacaaggatgggtccagcaaagcatttcttctagttccagctcactt
aaatcagctccaatgggcactagaacaagggcagctggtattgttggaattgaaagaaaa
attgaagaaaaacaaaagaaaaccgaccaaaatatctcagtggcatttcaagacttaacg
aaattaatggaaaaagctaaggaaatggttgcattgtcgtccaacattgctacaaaaata
aaagataagaaaggagatatcacagatgatgaaactgttaagtttaaatcttatctacta
agtcttggaataccaaaccctgttacaaaagaaacccatggttcaggaacacattaccac
atgcagcttgctcatgaagtttgtaaatcacttgataaagctgttggagaatgtggcggc
atgatgttgttgtcagatgcgtattgcaggataaaccgggcaagaggaatggagctttta
tcaccagaggatttgcttaatgcatgcaagatgcttgacaatctaaatctttctttgaaa
ttgcggactttcgcaactggagtagcagttttacagctgcaatctcacagtgatgatctc
attatagaacagactacgcaactagtggaagaaagcacttctctaagcgctcaggaactg
gctaatcttgttaacatatcggttctgcttgccaaggaaaggcttcttttaaccgaatct
gtgggtggagtttgtcgtgatgactcagacgaaggactgcgattttttccaaacctcttt
ttgacaaaagtggtttaa
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