KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143467264
Entry
143467264         CDS       T11416                                 
Name
(RefSeq) replication protein A 14 kDa subunit-like
  KO
K10740  replication factor A3
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03030  DNA replication
clep03420  Nucleotide excision repair
clep03430  Mismatch repair
clep03440  Homologous recombination
clep03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    143467264
   03420 Nucleotide excision repair
    143467264
   03430 Mismatch repair
    143467264
   03440 Homologous recombination
    143467264
   03460 Fanconi anemia pathway
    143467264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clep03032]
    143467264
   03400 DNA repair and recombination proteins [BR:clep03400]
    143467264
DNA replication proteins [BR:clep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    143467264
DNA repair and recombination proteins [BR:clep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     143467264
   MMR (mismatch excision repair)
     143467264
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     143467264
SSDB
Motif
Pfam: Rep_fac-A_3 CcmE DUF5818 TfuA
Other DBs
NCBI-GeneID: 143467264
NCBI-ProteinID: XP_076821140
LinkDB
Position
1:complement(23043008..23043805)
AA seq 117 aa
MDELYATPRPRVTASMLPKYVGNNVTMVGLVDSGDIASDGNSFRLKVDDKTAVTVVMNTP
LNELLEDVVEVTGTVNNQSHLQCITYRKITSTVEFSLDNYNKTVELAHSHPEYCTYK
NT seq 354 nt   +upstreamnt  +downstreamnt
atggacgaactttatgctactccgcggccaagagttacagcttctatgctcccaaagtat
gtcggaaataatgttaccatggtgggattagtagattcaggtgacatcgccagtgatgga
aactcatttcgtttgaaagttgatgacaaaacagctgtgacggtagttatgaatacgccc
ttgaatgaacttttagaagatgtagttgaagttactggaactgtgaacaatcagagccat
ctgcagtgtattacttaccgcaaaattacttccactgttgagttttctttggataattac
aataaaactgttgaattagctcacagccatccagaatattgtacctacaaataa

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