Clavelina lepadiformis (light-bulb sea squirt): 143468131
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Entry
143468131 CDS
T11416
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
143468131
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143468131
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
143468131
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
143468131
NCBI-ProteinID:
XP_076821253
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Position
1
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AA seq
540 aa
AA seq
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MAIFVPGLVVLVVFYLLIFAVGLWAAWKKWKGEEEDKYNERQMVGGRDMGMIVGSFTMTA
TWVGGAYINGTAEYVYTPGLGLYWTQAPLVSIPCLMLVAIFFAKKMRTQNFTTILDPLQY
KFGRYMGVLLYIPALLSDLFWSAAILAALGGTLSVIIGLDVLISVIISACIAVLYTLVGG
LYSVAYTDILQLVVVLIGLMLALPFAFTHPAVSSIATTAYESPGWLGTPDTATIGLWIDF
VLILTLGGIPAQVLYQRVLAMKSVRKSQMTLVIAGIGTAIFGLPSILFGAIAASTDWNAT
EYDSAGKSPLENNEHYYILPIVLRYLTPTPVAVIGLGALAAAVMSSIDSAILSSSSMFSR
NVYQFTFRNKASKRELEWVMRCTTICFAIPAAAIAITVESIQNLWYLCIDVVYVVLFPQI
TSVMYLDPNTYGSLPAYFIGIILRLGGGEPSFKLDPFIHYPGGLNFPFKTFAMVVSFITL
VVFSYAAKYLFEKGIIPEKYDIFQCKLASGGRSIRIDEIMESDHVYENKTVGKETETSKL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatttgtgcctggtttggttgttctagttgtcttttacttgcttatttttgcc
gtcgggttatgggctgcttggaagaagtggaaaggagaagaagaggataaatataatgag
cggcaaatggtgggcgggagagatatgggaatgattgtcggttctttcactatgacagca
acctgggtaggaggcgcgtacatcaacggtacagccgaatacgtttacacacctggactt
ggcttatattggacccaggctcctttagtgagcattccttgtctgatgcttgtggcaatt
ttttttgcgaaaaaaatgagaacccagaactttactacgattcttgacccgctgcaatat
aaattcggccgttatatgggcgtacttctctacatccctgctcttctgagtgacctcttc
tggagcgctgccatacttgcagctttgggtggaactctctcggtcataattggccttgat
gttttgatatcagtgattatatctgcctgcattgctgtcttatacaccttagttggaggt
ctctactcagtcgcctacactgacattttgcagcttgttgttgtcttaattggattgatg
cttgccttgccctttgcctttacacaccctgcagtatcgagcatcgccaccaccgcctat
gaatctccaggctggctcggtaccccagacactgcaaccatcggcctttggattgacttt
gttttgatattaaccctgggtgggattcccgcgcaagtcttataccaacgggttcttgca
atgaaaagcgttcggaagtcacagatgacgcttgtaattgccggtataggcactgcaatt
tttggtcttccttcgattctgttcggagcaattgcagcttctacggactggaatgccact
gagtacgacagtgctggtaaaagccctctggaaaacaatgaacattactacatccttccc
atagttctccgctaccttacacccaccccggtggctgtcattggcttaggagcgttagct
gcggctgtgatgtcatcaatagacagcgccatattgtcatcttcgagtatgttttcaagg
aacgtctaccagtttacttttcgtaataaggcttctaagcgagagcttgaatgggtgatg
cgatgtaccaccatctgctttgctattcccgccgctgcgattgcgattaccgtcgaatca
atccaaaatttgtggtacttgtgcatcgatgtggtttatgtggtgctatttccacagatc
acttcggttatgtacctggatcccaatacctatggctctcttcccgcttacttcattgga
atcattttacgcttgggaggaggggaaccaagttttaaactggatcctttcatccattat
cctggaggactcaacttcccattcaagaccttcgctatggttgtgtctttcatcactctt
gtcgtgttttcctacgcggccaagtatctttttgagaagggaatcatcccggaaaaatac
gacatcttccaatgcaaattggccagcggaggtcgttccattaggatcgatgaaataatg
gagtcggatcacgtctacgaaaataaaaccgtaggaaaagaaactgaaacatctaagttg
taa
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