Clavelina lepadiformis (light-bulb sea squirt): 143468179
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Entry
143468179 CDS
T11416
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
143468179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143468179
04147 Exosome [BR:
clep04147
]
143468179
04090 CD molecules [BR:
clep04090
]
143468179
Enzymes [BR:
clep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
143468179
Transporters [BR:
clep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
143468179
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143468179
CD molecules [BR:
clep04090
]
Proteins
143468179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA
Zeta_toxin
AAA_22
ATP-synt_ab
RsgA_GTPase
AAA_16
AAA_5
G-alpha
AAA_29
AAA_15
NB-ARC
Rad17
AAA_7
TsaE
AAA_30
HKR_ArcB_TM
Motif
Other DBs
NCBI-GeneID:
143468179
NCBI-ProteinID:
XP_076821319
LinkDB
All DBs
Position
8:1453985..1465382
Genome browser
AA seq
1325 aa
AA seq
DB search
MAITKVENSPLLEKKQDEEEKHKHPPPIRFLQLFRYATTLDYFYIGLGSLAAAGYGITSP
ALFLFFGQGINVFTTFGRYKACGLNYETCRYENYTTMTKTQWNDQIMPVIVSFGNSSMVS
IYAFIITGSIALVTASLQMFFWNISSTRQVKMIQIMYFRAFLRQDVGFHDLNFSGELNSR
LSRYDIIYTIIYIRRDHSWCENYLFVKKAFADFVENYLKIQVFFSDTVTLRKAIGDKLSL
VIAYFAMGVASIVVALVYAWKVALVALAMTVFMMIPVGVLYKINDICKKRETDAYSKAGA
IAEETISSVKTVASFGCQMKEVERYDHNLKEAKKAAMFRGGAFGVCMGLMFFTMYCQNAL
SFWYGTTLVLHGEIEAGDMLMAVFNVLFAGWCIGTLSTNISSIPQARAVAARIYQVIDRV
PEIDIFSNEGDHPSHDDVTIKFSDVNFKYPTREDVKVIKDMSFTIEHGQRVGLVGQSGCG
KSTIVQLIQRFYDVKDGSVHIGGKNVKNLNLKMLRDLIGVVSQEPVLFGTSIAENIRWGR
TGISDEELHEAAKKANAFNFIMKLPEKFDTLVGEAGSQLSGGQKQRIAIARAIARNPKIL
LLDEATSSLDTHSEAKVQAALDRASEGRTTVVVAHRLSTIRDCDKIIALHDGSIMEQGNH
EELMSNPGGVYHTLVMMKSVDHCATGEVDEEKFPALVLGSPTKKLSPIKSSLQKDLKHVE
VKDEEDDDDDEEEEEEVDLPKFDFTRFLKMNAPEWLYVISGCFFSVLAGAPDPLSALIIA
EFFKVFTYTDVQEALQRASFLGGMFVVLGAGALLSNILENLCFAKSGMELTMRLRKGVFK
SILHQDISFFDERGHGTGTLCHRLAVDASRVQNCTGETIGIVMKNISTLVVALGLSFAYG
WKVTLVVIPFLPFMVLGTFVQIKFESGEDEQSTAEENEAGALATEAIMNIRTVASLTKEH
ELVDMYTTKIKGSSKKIYIKSAVKGLVYGFGQCATFFAFAAAFKIGSEVIKSGEMTFYEF
ILVLIAVMFGAIGIGANTAFAADFAKATLSAARMIAILDRIPFIDASSTKGTKPDHCKGE
IFIKSVSFRYPNRPDALVLEGINVRVKPGQTLALVGQSGCGKTTIIKLISRFYDVDGGGV
YLDETDIRDLNVAWLRQQIGVVSQEPVLLNQTIKENIQYGDCTREISDEEIEEAAEKANA
ANFISGLPDGYDTPVGAKGGKLSGGQKQRVAISRALVRNPKVLLLDEATSALDTESEKMV
QEALDAAREGRTSIVIAHRLSTVKNADQIAVIDHGRVVELGTHESLIVKRGLYYKLVNAQ
FMPSL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcgataacaaaagtagaaaattctcctctgctggagaagaaacaagatgaagaagag
aaacataagcatcctccgcctatcaggttcctacaactttttcgatacgccacgacgctg
gattatttctacatcgggctcgggtcgcttgctgcggcaggatatggaattacaagtccc
gccttgtttctttttttcggccaaggtatcaacgtcttcactaccttcggtcgctacaaa
gcatgcggcttaaattatgagacttgccgctatgaaaattacaccaccatgaccaaaacg
caatggaacgatcagataatgcctgtgatcgtatcctttggtaatagcagtatggtgtcc
atttatgcgtttattatcactgggagcatagcacttgtgaccgcatcactacagatgttt
ttctggaatattagctcgaccagacaagtcaaaatgatccagataatgtattttcgagcc
ttcttacgtcaggacgtcggatttcacgatctcaatttttctggtgaactaaattcaaga
ttgtcgaggtatgacatcatatacacaataatatacatcagacgcgatcattcttggtgt
gagaattatttatttgtgaagaaagctttcgcagattttgtagaaaattatttgaagatt
caagtatttttcagtgatacagtcactttaagaaaggctatcggcgacaaactgagtttg
gtgatagcttattttgccatgggtgtggcgtcgattgtcgtggcacttgtctatgcatgg
aaggttgctcttgtggcgcttgccatgacagtattcatgatgataccagttggtgtttta
tataagataaacgacatttgtaagaaacgggaaacagatgcttattcgaaggctggagcg
attgcagaagaaacgatttcttccgtaaagactgtggcatcttttggttgccaaatgaaa
gaagtggaaagatacgatcacaatctaaaagaggcgaaaaaagccgctatgtttcgcggt
ggtgcctttggcgtctgcatgggactgatgttctttaccatgtattgccaaaatgcatta
tctttctggtatggaaccactctggtccttcacggagaaatcgaagcgggcgatatgctt
atggctgttttcaatgttctctttgccggatggtgcatcggcacactcagcacaaatatc
tcgtccattccacaagctcgtgccgttgctgccagaatatatcaagtcatcgatcgagtt
cctgaaatcgatattttctcaaacgaaggggatcatccaagtcatgatgacgtcacaatc
aagttttcagatgtcaatttcaaataccctaccagagaagatgtgaaggtcattaaggat
atgtcctttacaattgaacacggacagcgagttggcctggttggtcaaagcggatgcgga
aaaagcacaattgttcaactcattcaaaggttttatgacgtcaaggatggatcagttcat
atcggcggcaaaaatgtgaaaaatcttaacctgaaaatgttaagagatttaattggagta
gtatcccaagaaccggtcctttttgggacgagcattgctgaaaatatccgctggggtcgc
actggaataagcgatgaagaacttcacgaagcggcgaaaaaagcaaatgctttcaatttc
atcatgaagctacccgagaaattcgatactttggtgggcgaggcaggaagtcaattgagt
ggaggacagaaacaaagaatcgcgatcgcgagagccatcgcgcgaaatcccaagatattg
cttcttgatgaagcaacgtcatcattggacactcatagtgaagcgaaagttcaagctgcg
ctggacagagcatcggaaggccgcaccacggttgttgtggctcacagattgtcgacgatt
cgagattgtgataaaataatcgcccttcatgacggtagtataatggagcaagggaaccat
gaggagttgatgtcgaatccaggaggagtttatcacactcttgtgatgatgaagagcgtt
gatcattgtgctaccggtgaagttgatgaagaaaaattccccgctcttgtcctcggcagc
ccaacaaaaaaactgtctccaatcaaaagttctttacagaaagatttaaagcacgtagag
gtaaaagatgaggaagatgatgatgatgatgaagaagaggaagaagaagtagatttgcca
aagtttgattttacccgatttctcaagatgaacgcaccggaatggctttacgtgataagc
ggatgtttcttttctgttctcgcgggtgctccggatccactcagcgcacttataatagcc
gagtttttcaaagttttcacctacaccgatgtgcaggaggcattacagagagcatctttt
cttggtggcatgtttgtggttttgggagctggagctctactcagcaacatcttggagaat
ctgtgctttgcaaaatccggcatggaactcacaatgcgtttgaggaagggtgttttcaaa
tcgattcttcatcaggacatctccttttttgatgagcgaggccatggtaccggtaccctt
tgccacagactggctgttgatgcttctcgagttcaaaattgcaccggagaaacgattgga
attgtgatgaaaaatatttcaaccctggttgtagctctcgggctatcttttgcttatggc
tggaaggtaacattggtagtgatcccttttctgccatttatggtgttgggtacttttgtt
caaataaaattcgaatctggagaagatgaacaatccaccgctgaagagaatgaagcaggt
gctcttgctacggaagcgatcatgaacattcgaacagttgcatcacttaccaaggaacat
gaactggttgacatgtacacaacgaaaatcaaaggatcttccaagaaaatttacatcaaa
tcggcagttaaaggcttagtatacggatttggtcagtgcgccacatttttcgcgtttgca
gctgctttcaaaatcggatctgaggtcatcaaatcgggagaaatgactttctacgaattc
attctagtactgattgcggtcatgttcggagccattggtattggagccaacactgcgttt
gctgcggactttgcgaaagccacgttatcggcggccagaatgattgccatcctcgatcgt
attcccttcatcgacgcatccagcacaaagggaacaaaaccggatcattgcaaaggagag
attttcattaaatccgtttctttccgctacccgaatcgaccagacgctcttgtgttggaa
ggcattaacgtcagagtaaaacctggacaaactttggctcttgtcggacaatctggctgc
gggaaaacgacaataatcaagttgatttccaggttttatgacgttgatggaggtggcgtg
tatttggatgaaaccgacatccgtgatttgaacgttgcctggttacgtcagcagattggg
gtggtttcccaagaaccagtcttgctcaatcaaacaatcaaagaaaatatccaatacgga
gactgcacgagagaaatcagcgatgaagagatagaagaagcagctgagaaggcgaacgcg
gcaaactttatttcggggttaccagatggttacgacacacccgtaggcgcaaaaggcgga
aagttgtcaggaggacagaagcagagagtcgcgatatcgcgcgctcttgttcgaaatccg
aaagttcttcttctagatgaagcgacatccgcgttggatacagaaagcgaaaagatggta
caggaggcgctagacgccgctagagaggggcgaacaagcatagtgatcgctcatcgactc
tcaacggtgaagaacgcggatcaaatcgctgtgattgatcatggaagagtggttgagctt
ggaacgcacgaatcactcatcgtgaaaagaggactttattacaaattggtcaatgcgcaa
ttcatgcccagcttgtga
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