Clavelina lepadiformis (light-bulb sea squirt): 143468292
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Entry
143468292 CDS
T11416
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep00310
Lysine degradation
clep00514
Other types of O-glycan biosynthesis
clep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
143468292
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
143468292
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clep01003
]
143468292
Enzymes [BR:
clep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
143468292
Glycosyltransferases [BR:
clep01003
]
O-Glycan biosynthesis
O-linked Gal type
143468292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Glycos_transf_2
CAP59_mtransfer
Thioredoxin_15
Motif
Other DBs
NCBI-GeneID:
143468292
NCBI-ProteinID:
XP_076821530
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All DBs
Position
8:complement(15693282..15698528)
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AA seq
593 aa
AA seq
DB search
MYSKYLPILVSLYLFHVFVSGQTNFKEKENVWKEELFKSPQDADFEYDPKIQAPTIFIAI
FVRNKEHSLPYFLNALYNQNYSKKRMALWIVTDHNTDKSAQLLETWVKHIRNEYHRVDYE
SVQSEWYYEGQKSNMDWPEERHVRLLQLRQQALVKARDQWADFILYVDADNILMNPYTIW
HLMSADVTIVAPALNTLGSYSNFWCGQDERGYYKRTEDYFPIKNRRKLGTFQVPLVHSTF
LIDLTHNDSLNLQFWPLRKDYNLDLDDIIIFSFNAKAAGIPVHVNNMHIYGYMPIPLKSD
QTLVEEVETFTHLLMEVMTEPPVQIGIEITPSPILNTLPSSSKLGFDEIYMINLLRREDR
YYRMKTVLDLQGISFKHFHAVDSKMMNTSYLKGLGIDMLPGFVDPYHGRTALTRGEIGCF
LSHYYIWQEVVEKGYKQVIVLEDDVRFENAFSRKLGHVMNEIQELNLNWDLIYIGRKRMQ
TEVPEKWVPGSKVLVEADYSFWTLGYLLSLSGAKKLLAGNPLGKMVPVDEYLPIMFNKHP
ISQYMDAFPNRNVVALSVEPLIVYPTHYTGQENYFSDTETSSIWEEETKKDEL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcaaatatttacctatacttgtatctttatatctttttcatgtgtttgtaagt
ggtcaaacaaatttcaaagaaaaggaaaatgtctggaaagaagaattattcaaatctcct
caagatgctgattttgaatacgatcccaagatacaagcaccaaccatttttattgcaata
tttgttcgaaataaagagcactcgttgccctattttcttaatgctctatataatcaaaac
tactccaaaaaaagaatggccttgtggattgtcactgaccacaacaccgataaatctgca
caactcctagaaacttgggtcaaacatatccgcaatgaatatcatagagtagattacgaa
tctgtgcagagtgaatggtattacgaaggccaaaaaagcaacatggactggcctgaggaa
aggcatgtcagattgctccagttacgacagcaagctttagttaaggctagagatcagtgg
gctgattttattttgtatgttgatgctgacaatattctgatgaacccatacacaatatgg
catctaatgtcagctgatgtcacaattgttgctccagccttaaacacactgggaagttat
tctaacttctggtgtggacaagacgaaagaggatattacaaaagaactgaagattacttt
cccattaaaaatcgtagaaagcttgggacatttcaagttcccttggttcattcaacattt
ttgattgatctaactcacaacgactccctaaatcttcagttttggcctctcagaaaagat
tacaaccttgatctcgatgatatcataatattttcatttaatgccaaagcagctggaata
ccagtacatgtgaataatatgcacatttatgggtatatgccgattccattaaaatcagac
caaactttggttgaagaagtggagacgttcacgcatctcttaatggaagtcatgactgaa
ccacctgtgcaaatcggaatagaaattacaccctcgccaatcctcaatacattaccatct
tcaagtaaacttggctttgatgagatttacatgatcaatttacttcgaagagaagatcgc
tattatcgaatgaaaactgtcttggatttgcaaggcatcagtttcaaacactttcacgca
gtcgacagcaaaatgatgaacacaagttatctgaaaggtttgggcatagacatgcttcct
ggtttcgttgatccttaccacggtcgaactgctttgactcgaggtgaaattggatgcttt
ctctctcactattacatatggcaagaggttgtggagaagggttacaaacaggtcatcgtg
cttgaagacgatgtgagatttgagaatgctttttcacgcaaacttggtcatgttatgaat
gaaatccaggaactcaacttgaattgggacttaatatatatagggcgaaaacgaatgcaa
acagaagttcctgagaaatgggtgcctgggtcaaaggttttggttgaagcagattattca
ttttggacacttggatatttgctgtctttatctggtgccaagaaactacttgctggtaat
ccgcttgggaaaatggttcctgtagacgagtatcttccaataatgttcaataagcatcca
atatcacagtatatggatgcatttccgaatagaaacgttgtagccctatctgtggaacct
ttaattgtctatcccacccactatacagggcaagaaaattacttcagtgacactgaaact
tcatcaatttgggaggaagaaactaaaaaagatgaattatga
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