Clavelina lepadiformis (light-bulb sea squirt): 143468383
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Entry
143468383 CDS
T11416
Name
(RefSeq) elongator complex protein 2-like
KO
K11374
elongator complex protein 2
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clep03016
]
143468383
Transfer RNA biogenesis [BR:
clep03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
143468383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
RecA_dep_nuc
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
143468383
NCBI-ProteinID:
XP_076821679
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Position
8:complement(16792907..16796440)
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AA seq
810 aa
AA seq
DB search
MDNSYSVKLKHIALCANRSVNCLDAGPLNLVAFGCSNSVALYKPIHWDSKKLCSIQSFNG
HKKKVLCVKWMKEFFDTELPCKSNVLFSGSADNTLRCWIFKDNQVAPILEKEFSFLGHKD
SITSIDAISTYDVHCQNKELYLVATSGADSSLRLWEAYDSLSQLECVQTMDFKHGFVLNV
AFHLLPNCKVPILACACDDFKIRIYVIDTGTEKQTAHFHNVLILPGHEDWVRNVDFITLH
TGEIYMATCSQDSFIRLWKIWLVNNKATEDKVQERYELKLRKQLFTINVNNTSFTFAASL
DAVLIGHENWVYSVQWQLTGKSTIGVNLLSASIDKTVVIWEYDDAAGIWVDKVRVGEVGG
NTLGFYGAQFSEDGKHIIAQSFSGALHGWDRRCDDQWEPAVMVSGHSSVVNDIDWEPKQG
RYLLTTSEDQTTRLVAEWKEDKSWHEIARPQIHGYDMQCLSMIHSTKFISGADEKVLRVF
DASSNFISNLRSLTEHDLVEMSSQAPEGATVPALGLSNKAVFSSEEKTPLSDRKEQYIEN
LFVPVKLIQPPPETYLLQNTLWPESRKLYGHVYEIFCLSCNHEATLVASAAKSSQAKHAG
IIIWEVDTWKQVTTLSGHTLTVTQMEFSPNDNYLVTVSRDRTWNLYRITKLEGVYNVEHL
AHSEKKTCHSRIIWSCSWSHDNTYFATASRDKKIMIWKVTPNEEQVVKRAIVGDCGEPVT
AIAFASHKLSTYLLAIGCESGSIKLSSFTENHILVDMIHFDSQIAHCLAVKRLKWKPGVS
RNDSMTLASCSQDHQVKFFEVTWESKPIEK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggataactcatattcagtgaagctaaaacacattgcactgtgtgcgaatcgttctgta
aactgtttagatgcaggtcctttgaatcttgtggcattcggatgctctaactctgttgca
ctttataaacctatccattgggatagcaagaaattgtgcagtattcaaagctttaatggc
cacaaaaaaaaagttctctgtgtaaaatggatgaaggaatttttcgatacagagttgcct
tgcaagtccaacgtcctcttttcaggttcggcagataacacactgagatgctggatattc
aaggataaccaggttgcaccgatcttggagaaagaattctcttttttaggtcacaaagat
tcaatcacaagcatcgacgcaatttctacttatgacgtgcattgtcaaaacaaggaactg
tatttagttgcaaccagtggagcagactcgagcttgagactctgggaagcatatgactct
ttatctcaacttgaatgtgttcagacaatggattttaaacatggttttgtacttaacgtt
gctttccatcttcttccaaattgtaaggtgcctatacttgcatgtgcgtgtgatgatttc
aaaattagaatctatgtgattgacacgggtactgaaaagcaaactgcacatttccacaac
gttttaattctgcctgggcatgaggattgggtgcgtaatgtagattttatcactcttcac
accggggaaatctatatggcgacttgctcgcaggattcttttattagattatggaaaata
tggttggtgaataataaagcaacagaagacaaggtacaggaaagatatgaactaaaatta
cggaaacaattgtttacgataaacgtaaataacacatctttcacatttgctgcttccctt
gatgctgttcttatcggacatgaaaactgggtatacagtgtgcagtggcaactgacagga
aaatccaccataggagttaacttgttgtcagcttcgatagacaaaacagtagttatttgg
gagtacgatgatgcagctggaatctgggttgacaaagtacgagttggtgaggtgggtggc
aatactttgggattttacggggctcagttcagtgaagacggcaaacacatcattgctcaa
agcttcagtggggcactgcatggatgggatcgtaggtgcgatgatcaatgggaacctgca
gtgatggttagcggacattcgtcggttgttaacgatattgattgggaaccaaagcagggg
aggtatttactgactacaagcgaagaccaaacaacacgtttggttgctgagtggaaggaa
gacaaatcctggcatgaaatagcgcgtccgcaaattcacggttatgacatgcagtgtctt
agtatgattcattccactaaatttatctctggagcagatgaaaaagttctcagagtattt
gatgcttcctcaaattttatcagcaatctgaggtctctgacagagcatgacttggttgaa
atgtcatcgcaagcacctgaaggggccactgtaccggccctcggtttatccaacaaagct
gtgttctcttctgaagaaaaaactccactaagcgatcggaaggagcagtatattgaaaat
ctatttgttccagttaagttaattcagccgcccccagaaacgtatttgcttcaaaacaca
ctatggccagagtcaaggaaattgtatggtcatgtttacgagatcttttgcttgtcttgt
aatcatgaagcaacacttgtggcctccgctgccaaatcttctcaagccaagcatgctggt
attataatttgggaagtggacacgtggaaacaagttactaccctgtctggccacacactt
actgttacacaaatggaattttctccgaacgacaattacttggtcacagtttctcgtgac
cgaacttggaatttgtatcgaattaccaaattggagggagtatataacgtggagcattta
gcacacagtgaaaagaaaacctgtcacagtaggatcatttggtcatgttcgtggtcccat
gataacacttactttgccacagcatcgagggataaaaagattatgatttggaaagttact
cctaatgaagaacaggttgtgaagagagcaattgttggagactgcggtgaaccagtcaca
gcaattgcatttgcatcacacaagctttccacttaccttctcgccattggttgtgaaagt
gggagcattaaattgtcttcatttaccgaaaatcacattcttgtagacatgattcatttc
gattctcaaattgcacactgtctggctgtcaaacggctaaaatggaagccaggtgtcagc
agaaatgattctatgaccctggcatcttgtagtcaagatcatcaagtaaagttctttgaa
gttacatgggaatcaaagcctattgaaaagtga
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