Clavelina lepadiformis (light-bulb sea squirt): 143468467
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Entry
143468467 CDS
T11416
Name
(RefSeq) DNA topoisomerase 2-alpha-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clep03032
]
143468467
03036 Chromosome and associated proteins [BR:
clep03036
]
143468467
Enzymes [BR:
clep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
143468467
DNA replication proteins [BR:
clep03032
]
Eukaryotic type
DNA Topoisomerases
143468467
Chromosome and associated proteins [BR:
clep03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
143468467
Centrosome formation proteins
Centriole proteins
143468467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
HATPase_c_3
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
143468467
NCBI-ProteinID:
XP_076821820
LinkDB
All DBs
Position
8:18827125..18841297
Genome browser
AA seq
1616 aa
AA seq
DB search
MLNLLSRVFISRFHSHSVSSNYCQSTFPHSTFIRKFFRKPRMDEFDELPKSPSQGGGRKR
LSVERIYQKKTQLEHILLRPDTYIGSVEPVTQAMWVWDEGVGMVNREITFVPGLYKIFDE
IVVNAADNKQRDPKMSSIKIDINAEKNRISVWNDGKGIPVVEHKVEKLYVPEMIFGHLLT
SSNYNDEDKKVTGGRNGYGAKLCNIFSHKFTIETSSKEYGKRYKQSWSTNMSKTHERKLV
DSTKSDFTCITFEPDLSKFHMTELDKDTVALLSRRAYDLAGSSPGVKIYLNGNRLPVKNF
KDYVQLYINDIKDENGEKLKVVHEQVNPRWEICLTSSDKGFQQISFVNSIATTKGGRHID
YVMDQVSKKLIEVVKKKNKGGVDVKPYQIKNHCWLFVNCLVENPTFDSQTKENMTLQTKK
FGSQCSLTDKFLKMAGSSGIVDSIMNWVKFKAQSQLQKKSAGKSNKLKGVPKLDDANDAG
TKHSLDCTLILTEGDSAKTLAVSGLSVVGRDKYGVFPLRGKLLNVRDASHKQIMENAEVN
NIIKIMGLKYNKKYELDEDLKSLRYGKLMIMTDQDHDGSHIKGLLINFIHSNWPNMLQRR
MLEEFITPIVKVTKGSQVLSFYTIPEFEEWQSSIENSSSWKVKYYKGLGTSTSKEAKAYF
ADMSRHRVRFKYSGPDDDGCIDMAFNKKRADDRKDWLTSFMEERRRCRVDSRPEPGADLY
NADTRTLSYKDFVNKELVMYSCADLERSVPSLVDGLKPGQRKVLYTCFRRNDKREVKVAQ
LAGSVAELSAYHHGEVSLQATIINMAQNYVGTNNVNLLQPIGQFGTRLHGGKDSASPRYI
FTMLSPLTRLLFPAVDDNLLTFLYDDNQKVEPSWYCPIIPTILVNGSEGIGTGWSTRVPN
HDVREVVANCRRLIRGEDPVPMVPSYKNFKGTIEELDANRYVVNGEVSMIDEKTLEITEL
PIRTWTQNYKESVLEPMALGTEKVPQQILEYKEYNTDMTVRFLVKMSEQKLKDADGKGLH
KFFSLQTSMSCHNTLVLFDEFGCLRKFNNTTEILKEFFQLRMKLYVKRKDYLMGLLTAES
KKLSNQARFILEKIEGKISIFNKAKKILIKLLQDRGYDSDPIKAWKEAMQQAEAENAATD
DDNESDDQVGSDYNYILNMPLWSLSKERKEDLLKQRDAKQAELEALKCKTPTQLWKDDLD
KFTEELDKVEQKEREDAMAPSDAQKKSVFGKGRLKGKVKQLTETKPSPHGIRVVPRIDPA
LKSRLTAGDKKPGRTKVKKEDPTVKKLDTYFKKVDEDGDKESGPSIDADEPPSLLSRLKK
SGSLKAGTKQTTLGFNSLPKKKDAKKKNPWQSDSDDSEDDKISDISISDNSESDFVPKKK
TRAAEKEPKKYRFDSDSDNNSLEDIDYGKDKTKPKNQPSSDEEDWKRKVKAKKSKLSSDD
EDSEPKAVATESSDEELFATKAKPKLRVKTESGREEESPKPSDKWDEIMGVKPKDKKRAP
LKRKKATKATKTSSASDGGQEKPPRKIAKVTLKKLEDSEIEQKKVKPTKPAPAKPKAAAK
PKKSKKNAWSSSENEDDDDDSDESLEVSEPVRPRTTTGRQHKPAKYTFSDDGDSDF
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatttgctttctagggtttttatcagcaggtttcactcccattctgtttcgtca
aactactgccagagtacttttcctcattctacgttcattcgcaaatttttccgcaaaccc
aggatggatgaattcgatgaattaccaaaatccccttcacaaggtggcggtagaaagcgt
ctctctgtggagcggatctatcaaaagaaaacccaacttgagcacattcttcttcgaccc
gacacttacattggctcagtggagcctgttacacaggcgatgtgggtttgggatgaaggt
gttggaatggtgaaccgggagatcacatttgtgcctggcttgtacaaaatatttgatgaa
atagttgtcaatgctgcagataacaagcaaagagacccaaagatgagctctattaaaatt
gatattaatgctgaaaagaatcggatatctgtttggaacgatggtaaggggattcctgtc
gtggagcacaaagtggaaaaactttacgttcctgaaatgattttcggacatcttcttaca
tccagcaattataatgatgaagacaaaaaagtcactggtggccgcaatggctatggtgcc
aagctgtgcaatatttttagccacaaattcaccatagaaacatcatcaaaagaatatgga
aaacgatataagcagtcatggagcacaaacatgagtaaaacgcatgaacgtaaactggtc
gacagcactaagtctgacttcacctgtatcacgtttgaaccagatttatcaaaatttcac
atgacggagttggacaaggacactgtcgctctcctatcgaggagagcgtacgaccttgct
ggatcctctcctggtgtcaagatttatctgaatgggaatagacttccagtgaagaacttc
aaagactatgtgcagctgtatatcaatgacatcaaagacgaaaacggggagaaactcaaa
gtggttcacgagcaagtcaaccccagatgggagatttgcctcacatcgtcagacaaagga
ttccagcaaatatcatttgtgaacagcatcgccaccaccaaaggagggcgccatatcgac
tatgtcatggatcaggtctccaagaaactgattgaagtcgtgaagaagaagaacaaaggt
ggagtcgacgtaaagccgtaccagatcaaaaatcactgctggctgtttgtgaattgtttg
gttgaaaatccaacctttgattctcaaaccaaggaaaatatgacgcttcagaccaagaag
tttggatcacaatgctctctcactgacaagtttttaaaaatggctggcagcagcggtatt
gtcgacagcatcatgaactgggtcaagttcaaggctcagagtcagctgcagaaaaagtct
gctggaaagtcaaataagcttaaaggtgttcctaaattggatgatgcgaatgacgccggc
accaaacattctctcgactgcactctcatcttaacggagggcgactcggctaaaacttta
gctgtgtcgggcctctctgtggtggggagggacaagtatggagttttcccgttaaggggt
aaacttttaaatgtgagggacgcttctcacaagcagataatggaaaatgctgaggtgaac
aacattataaagatcatggggctgaaatacaacaagaagtatgagctggatgaggacttg
aagtctctacgatacgggaagctgatgatcatgacagatcaggatcacgacggctcccac
atcaaaggtcttctcatcaacttcattcacagcaactggcccaatatgttgcaaaggaga
atgctcgaagaattcatcactcctattgtgaaagtgaccaaaggaagccaggtcttgtca
ttttacaccattcctgaatttgaagaatggcagagttctattgaaaactcaagctcatgg
aaagtgaagtattacaaaggtttgggtacttctacttcaaaggaggcaaaagcttatttt
gctgacatgagtcgacaccgagttcgtttcaagtattcgggtccagacgacgacggctgc
attgacatggcattcaacaagaaacgcgctgatgatcgtaaggattggctgactagtttc
atggaagaaagacgaagatgccgcgtcgattcacggccggagccaggagcagatctgtac
aatgcagatacgcgcactctctcctacaaggactttgtcaacaaggaactggtgatgtat
tcgtgcgctgacctggaacgatctgtgccctctttggtggatgggcttaaacctggtcag
aggaaggtgttgtacacttgctttcgacgaaacgacaaacgtgaagtcaaagtggcccag
ttggctggttccgttgctgaactgtcagcgtaccaccatggagaggtctcgttacaagcc
accatcataaacatggctcagaactacgtgggaaccaacaatgtcaacctgctgcaaccg
atcggacagtttgggacccgattgcacgggggaaaggattctgcctcaccccgttacatc
ttcacaatgctcagcccactcactcggctgctattccctgctgttgatgacaacctgctc
acgttcctctatgatgacaaccagaaggtggagccctcctggtactgccccataatacca
accatccttgtcaacggatcggaagggattggaactggttggtcaactcgagttccgaat
cacgatgttcgtgaggtggtcgccaactgccgacgcctcatcagaggagaggatcctgtt
cccatggttccgagttacaagaacttcaaaggcacgattgaagaactcgatgcgaacaga
tatgtggtgaatggagaggtttccatgatcgatgagaagacacttgagatcaccgagctt
ccgatcaggacgtggacccagaactacaaagagtcagttttagaaccaatggctctgggg
accgagaaagtccctcagcagatcttggagtacaaggaatacaacacggacatgacggtc
cgcttcctcgtcaagatgtccgagcagaagctgaaggatgcagatgggaagggcctccac
aaattcttctccttgcagacttcaatgagctgccacaacaccttggtcctgtttgatgag
ttcggctgtcttcgcaagttcaacaacaccaccgagatcttgaaggagttcttccagctt
cgaatgaagctctatgtcaagaggaaggattacttgatggggttgctcactgccgaatcg
aagaagctctctaatcaagcacgctttatccttgagaagattgaaggaaaaatttctatc
tttaacaaggcaaagaagattttgatcaaactccttcaagacagaggatatgattcagac
cccatcaaagcatggaaggaagcaatgcagcaggctgaagcggagaatgcagcgacagat
gacgacaacgaatcggatgatcaggtgggttcggactacaactacatcctcaacatgccg
ctgtggagcttgagcaaggagcgaaaagaagatctcctgaagcagagggatgccaagcaa
gcagagttggaggcgctaaagtgcaagactccgactcaactctggaaggacgatttggat
aaattcactgaagaacttgacaaagttgagcagaaggagagagaagacgcgatggcacct
tcagatgctcagaagaagtcagtgtttggcaaaggaaggctgaagggaaaagtgaagcaa
ctgaccgaaaccaaaccctcaccacacggcatcagagttgtcccgagaatcgatcccgcg
ttgaaatctcgactcacagccggtgacaagaagccaggtcgtacaaaagtgaagaaagaa
gacccgactgtgaagaaactggacacttacttcaagaaggtcgacgaggatggtgataaa
gaaagtggcccttctattgatgccgatgagccgccatcgttactcagccggcttaaaaag
tcaggttcactcaaagcaggaacaaaacaaacaacactgggattcaactcgctcccgaag
aagaaggatgcgaaaaagaagaacccgtggcagtcggacagtgacgatagcgaggatgac
aagatcagtgacatttcgatctcggataactcggagtcagactttgtgccgaaaaagaag
actcgtgcagcagaaaaagagccaaagaaatatcgtttcgattctgactccgataacaat
tctctggaagatattgactatgggaaggacaaaacaaagccaaagaaccagccttcgtcg
gacgaagaagattggaagcgaaaagtgaaagcaaagaaaagcaagctctcgtctgatgat
gaagattctgagccgaaagcagtggccacagagtcttcagacgaagagttatttgcaacg
aaagctaaacccaaattaagggttaaaacggagtccggccgtgaagaagaatctcccaaa
ccgagcgacaaatgggacgagattatgggagttaaacctaaagacaagaagcgggcgccc
ctgaaacgcaagaaggcgacaaaggcaactaagacgagctcagccagcgacggaggtcag
gaaaaaccgcctaggaagatcgccaaagtcactcttaagaagctcgaagactctgaaatc
gagcagaagaaagtgaaaccaaccaaacctgcaccggcgaagcctaaagcggccgccaag
ccaaagaagtcgaaaaaaaatgcttggtcatcgtccgaaaacgaagacgatgacgacgat
agtgatgagtcattggaggttagtgagccagttcgaccccggactaccactgggaggcag
cataaacctgccaagtacacgttttctgatgatggcgacagcgacttctga
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integrated database retrieval system
