Clavelina lepadiformis (light-bulb sea squirt): 143468609
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Entry
143468609 CDS
T11416
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
143468609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143468609
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
143468609
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NCBI-GeneID:
143468609
NCBI-ProteinID:
XP_076822055
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Position
8:complement(2277231..2280749)
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AA seq
592 aa
AA seq
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MISSSGDTDKDVVTKTTKVERQTWSKPWDFLISSAGLSIGLGNIWRFPYLCFKYGGGAFL
IPYMLSIVLLAIPLLMLEVSLGQSVRKGVIASWATVPLFKGISLAAGMLMIHSNISYPVI
LAWVLKYLVSCFSRNLPWVSCDNEWNTEHCVSYKQASHENQTNNLLNVSTIVRQATNETG
NLFQMSSAEEFWNYGVLGISKGLNHVGSLRADLVLYLAVIWILGYLATFKGIKWSAKVVY
FTATVPIILIIIVTIKGATVEGASVGIYYYLKPDMTKLRNPEVWIGAATQVLYSYGLCGA
GMITMGSYNKYHQNFIRDVIIFTVSNGFASFLCGFAVFSTLGSMAFYQNLTMVEVVQSGP
GLVFIAYPQALTLLPLPQLWNAIFFLTLLLLGLDSQFVYMESFCALFMDFSVRLREFHKY
SREIFLALCNIGFFLVGLSCVTEGGIYVFEIFNTYGVAGWCLFFIAACEFVAVGWVYGAS
HYWKQINRMIGPSKLQPVVTFIWKFFGPSICLAVSVYYVAAHTPLTVGSYVYPPWAQVIC
HLVSASSAVWIPLYAFYLVATSKKSLSQLRRKEKNKITNISLTSTDEKEMMI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgagttctggcgatactgacaaagacgtggttacaaaaacgacaaaagtcgag
agacaaacgtggagtaaaccgtgggatttcctaatatcaagcgctggtctttcaattgga
cttggtaacatttggagatttccatatttgtgcttcaagtatggcggaggtgcatttctt
attccgtacatgttatctattgtccttttggcgataccgcttttgatgttggaggtctca
cttgggcaatcagtaaggaaaggtgtaattgcgtcatgggcaactgtacctttgtttaaa
ggtattagcctggcagcaggaatgctaatgatccattccaacatctcttacccagtgata
ttagcatgggtactgaaatacttggtgtcgtgtttttctcgaaacttaccttgggttagt
tgtgataatgagtggaacaccgaacactgcgtgagttacaagcaggctagtcatgaaaac
cagaccaacaaccttctcaatgtatcaacaattgtacgtcaagctacaaacgaaacaggg
aatctctttcaaatgtcttcagctgaagagttttggaattacggagtcttgggaatttcc
aagggacttaatcacgtggggtctttgcgagctgatcttgtactttatttggctgtgata
tggattctgggatatctagcaacatttaaaggaattaaatggtcagctaaggtagtttac
ttcacggcaactgttccaattattttgattataatcgtcactatcaaaggagcaacagta
gagggcgcgtctgttggaatttactactatctaaaaccggatatgacaaaattgcgaaac
ccagaggtgtggattggtgcagcgacccaggttttatattcctacggtttgtgtggcgct
ggcatgataactatgggaagctacaacaaataccatcaaaactttatcagagacgtgatt
attttcacggtatcaaacggatttgcgagtttcttgtgcggttttgccgttttctctact
ttaggatcgatggcgttctatcagaacttgactatggttgaagtagtccagtcgggacca
ggattagtttttatagcttacccacaagctttgacgttgcttcctctgccacaactatgg
aacgctatatttttccttactttattactccttggattggattcgcagtttgtgtatatg
gagagcttctgtgcgctttttatggatttttctgttcgtttacgagaatttcacaaatac
tccagagaaatattcctggcactttgtaacattggattcttcttagttggactttcgtgc
gtcacggagggtggaatttatgtctttgagatatttaacacctatggcgtggctggatgg
tgtttgttcttcatagctgcttgtgagtttgtggcagttgggtgggtgtacggtgctagt
cactattggaagcaaattaatcgaatgataggacccagcaaattacaacctgtggttact
tttatttggaagttctttggcccatcgatttgtttggccgtctctgtttattacgttgcg
gcacacacaccattgactgttggaagttacgtttatccgccgtgggcacaagtcatatgc
catcttgtttctgctagttctgccgtctggattcctctgtatgccttctatcttgttgcc
acttctaaaaaatctttgtctcagttacgccggaaggaaaagaacaaaataacgaacata
agtcttaccagcacagacgaaaaagaaatgatgatttga
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