Clavelina lepadiformis (light-bulb sea squirt): 143468675
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Entry
143468675 CDS
T11416
Name
(RefSeq) cadherin-2-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clep04515
]
143468675
Cell adhesion molecules [BR:
clep04515
]
Cadherins
Major cadherins
143468675
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Fibulin_C
VP1_VP3
DUF7756
Stevor
Motif
Other DBs
NCBI-GeneID:
143468675
NCBI-ProteinID:
XP_076822125
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Position
8:7223224..7236794
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AA seq
763 aa
AA seq
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MNISIVILSILSLNILFAHCFVDVNNKGLISRIRVKREWTYPPINTVETSPQAVAYFKQK
IIGTVKSSTNPPKYELVPTVAVKDGIFDLVTNPGSASADIWQLKPVDREQTPRITLTILA
LDANGNKVEDPVEVTVNVLDVNDNAPVFVQSSLHGNVSEAATIGTILNMKVEATDADLKG
ENYGVVSFYYVSPTDDKKFNISENGQQILLNDEVDFETTPQLTFVVVAKDGYHGASRSET
TATVTITVLDANDHAPVYTNDKFDTSVGELLPVQSTVMKLSASDIDQGINKAVSFKIDSG
NTDEQFSVRSNPSADGDSTGEIVLNKPLDFESGLTDFSLRVTAYNKDAKNPDLYSTTKTF
EIKVTDENEAPQFTQEAYSGYVRENNPDPVPDIVTVQAIDNDFGGNQTVTYTIDNNEGWF
IISSDGKITANEPVDREHPSVNPVTNIYELAVRATDNHPVHPRSSVVTVNVEIGDVNDNA
PEKGSGWREIVCENVNRKYKNVTIVTVVDKDTPQNGPPFHAKILEYTDIFMAEGYDDDRF
GILSDVLQFDAAEQNLYEIPIQLTDSTNIPGESVMTSTQTLTLSICSCNSDYVPDCSFTK
RVVGAGFSVAAIVAIIAAILLLLIIVLAVVAYRRRNMVELEKPVPFFNKDFIFENYQNLQ
VYLDEDIGHEDIPSDTDIGDYMNRFLFFFSTYNQAKDIADNDPTAPPFDSLLVFDYEGQG
SDAGSLSSLNSGTTDGSQDYDYLNNWGPRFKKLADMYGGGESD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatccattgtcattctctcaatactctcattgaacatcctttttgcccactgt
ttcgttgatgtgaacaataaaggattaataagcagaattcgtgttaaaagagaatggacc
tatccacctataaacactgtggaaacaagccctcaggctgttgcatactttaagcaaaag
ataattggaacggttaaatcaagcacaaatccccccaaatatgaactagtgcctaccgta
gctgttaaagatggaatatttgatctggtaactaaccctggatcagcttcagctgatatt
tggcagctgaaaccagtagatagagagcaaactccacgtattaccttgacaattttggca
ttggatgctaatggaaataaagtggaagatcctgttgaagttacagtcaatgttttagat
gtaaatgacaatgctccagtatttgtccaatctagcttacacggaaatgtctcagaagca
gcaacaataggcacaatcttaaacatgaaagtggaagcaacagatgcagacttgaaggga
gaaaattatggagttgtatcattttattatgtcagtccaactgatgataaaaaatttaat
atttccgaaaatggacaacaaattcttctaaatgacgaggttgatttcgaaaccacaccc
caattaacttttgtagttgtggctaaggatggttaccatggagcatcacgttccgaaaca
acagcgacggttacaataactgtccttgacgcaaatgatcatgcgccagtatatacaaat
gataagtttgatacctcagtgggtgaacttttgccagtgcagtcaacagttatgaagctc
agtgcttctgacattgatcaaggaattaacaaagcggtttcctttaaaattgattctggt
aatactgatgaacaatttagtgttcgttccaaccccagtgctgatggggatagtacagga
gaaatagttctcaataagccacttgattttgaaagtggactcacagatttttcattacgt
gtaactgcttacaacaaagacgctaaaaatcctgatctatactcgacaactaaaaccttt
gagattaaagtaactgatgaaaatgaagcaccgcagttcacacaagaggcctacagtggc
tatgtaagggaaaacaacccagatcctgtaccagacattgtaacagttcaagccatagac
aatgattttggtggcaaccaaacagtcacatacacaattgataacaatgaaggctggttt
atcatttcgtctgatggtaaaatcaccgcaaatgaaccagtggaccgtgaacatccatct
gtgaatccagtgaccaatatatatgagctagctgttcgggctactgacaatcatccagtg
catcccaggtcatctgtagtaactgttaacgtagagattggtgatgtcaatgataacgcc
cctgaaaaagggtcaggatggcgagaaattgtatgtgagaatgtcaatcgaaaatataaa
aacgttacaattgtgactgttgtggataaagatactccacaaaatgggcccccatttcat
gcaaaaattttagaatacacagacatcttcatggctgaaggatatgatgatgatcgattt
ggaattttgtctgatgttttgcaatttgatgccgcagagcagaatctctatgaaattccc
attcagcttacagactctactaacatacctggtgaaagtgtcatgactagtacccagacg
ttgacattgtccatctgcagttgtaacagtgattatgttcctgattgttcatttaccaag
cgagttgtgggcgccgggttttcagttgctgctatagtagctattattgctgctattctg
ttattactgatcattgtacttgcggtggtggcctacagacgtcgtaatatggttgaattg
gaaaagccggttcctttctttaataaggattttatttttgaaaactatcaaaaccttcaa
gtctatctcgatgaagacattggacatgaagacataccttccgatactgacattggtgat
tatatgaataggttcctgttttttttttctacatataaccaggcaaaggatattgcagac
aatgaccctacagcaccaccatttgattcacttctggtcttcgactacgaagggcaaggc
tccgatgcaggctccttgagctcgttgaactccggaacaaccgatggttcgcaggattac
gactaccttaacaattggggaccaagattcaagaaactggctgacatgtacggcggtggt
gagagcgattaa
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