KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143469040
Entry
143469040         CDS       T11416                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04137  Mitophagy - animal
clep04144  Endocytosis
clep04145  Phagosome
clep04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:clep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    143469040
   04145 Phagosome
    143469040
   04137 Mitophagy - animal
    143469040
   04148 Efferocytosis
    143469040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clep04131]
    143469040
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clep04147]
    143469040
   04031 GTP-binding proteins [BR:clep04031]
    143469040
Membrane trafficking [BR:clep04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    143469040
 Endosome - Lysosome transport
    143469040
Exosome [BR:clep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   143469040
  Exosomal proteins of other body fluids (saliva and urine)
   143469040
  Exosomal proteins of colorectal cancer cells
   143469040
  Exosomal proteins of melanoma cells
   143469040
GTP-binding proteins [BR:clep04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    143469040
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 143469040
NCBI-ProteinID: XP_076822690
LinkDB
Position
8:complement(14109221..14115990)
AA seq 217 aa
MASRAPQRPNNASPQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLQDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQR
QASPNIVIALAGNKSDLSNKRMVDHDEAAAYSDENGLLFMETSAKTAMHVNDIFLAIAEK
LPKNDAGGPTPHRSPGGVELENGGGSNPQGGCCGRSQ
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcaagtcgagcacctcaaagacctaataatgcgtcaccacaagggaaaatctgccaa
tttaagttggtattgcttggtgaatctgctgtggggaaaagcagtttggtattacgattt
gtaaaaggccaatttcatgaatatcaagaatccacaatcggagctgctttcttaacgcaa
acagtctgccttcaagatacaactgtgaaatttgagatatgggatacagctgggcaagaa
agatatcacagccttgctccaatgtattacagaggggcacaagcagccattgttgtttat
gacattacaaaccaggacacatttgcacgagctaaaacttgggtgaaagaacttcagaga
caagcaagtccaaatatcgtcattgcacttgctggaaacaaatcggacttatcaaacaag
aggatggttgaccatgatgaagcagctgcatattcagatgaaaatggtttactttttatg
gaaacttcggcaaaaacagcgatgcatgtcaacgatatatttttagctattgctgagaaa
ttgcctaaaaacgacgcaggaggccctacccctcatcgttccccaggtggtgttgagctt
gaaaatggtggcggtagtaatccacagggcggctgttgcggacgatctcagtga

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