Clavelina lepadiformis (light-bulb sea squirt): 143469069
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Entry
143469069 CDS
T11416
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143469069
Membrane trafficking [BR:
clep04131
]
Protein recycling
Others
EARP complex
143469069
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
143469069
NCBI-ProteinID:
XP_076822742
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Position
8:complement(7294802..7311604)
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AA seq
943 aa
AA seq
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MKKIRGLFDNVGKHSTSVIKHQHTDDINIGAPKYAYKDEARRFTTNPQADREAIESIDKV
FYGDQEAINPYELDNLPEALSLGDVEVRREKLRQQVNAISKKLSDVILENQPSYTKELKD
VQELQRSLHNAFIICSNGRRFLMSVSTRSTTAGLKLLASQQKRHNLLALCTALETIRTLQ
HTDIRLREMLEEEDYDGAIQLCLECQKAASTYRHYHCIKDLSSKLQDTLEQIEEQMDVAL
SKTCKTFDENVYAKLKIAYQLLGKTQSAMDQLLMHYTTCIHNTAFHVVLGFAELGSSKNN
LHKKQYKDLCTHISGEIYIPCLMEMCKALWSIMHCYHKTSVWHKNCISANGLDVAEEVET
EEYINRKLSHGRHRIWADVQSRIRTYILSCDLSVFKYDDFITVLDIVKRFILVGVDFCRN
TIDETEPQTTTDNLNEPLRKQTLSYFYNHHKSRLEELLMFLDNEAWQPCPVKSSFEVLNM
QEFKFLRQLDVDDDNLFDNNQENFASNLPGIKYFDPYTNESHPFADLEKMSQKANSNDIR
QVRYDSYEASDEDDMDDELHQEYIDERTGESPVSDNASKVLHGPIMTNTALHVLRLCGSY
LKMCDVLKPIAIDVVVCMTQLFDLYFYAVFEFFSTSHEKEKYRYERLTSTIKRMEESLFL
PISTNAENEATLPPSSEKIARPTLSPVVDLNKNENNYGIMERIVATESLICLSEQFQSLQ
KYLELMIPQSKKAFLHQFYSQTVRSSADVRWTSYWEFSSRCINMTSTIEKMFLVNWDIKD
IMSQHNAYVDQLLKELGTFKSRLQQSVRSVQMPEAVSKVIWNHCIRISNQVFVEGFSNVK
KCSNEGRALMQLDYQQFLMKFEKLANIRPIPNREYVEAYIKAYYLTENDLENWMRTHIEY
TPKQLSSLVNCSATSYSSSTAASTNRNAKQRMMSLIEELTMRK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatccgtggtttatttgacaacgttggaaagcattcaacatctgtaattaaa
catcaacacactgatgacattaatataggtgcccctaagtatgcttataaggatgaagca
aggagatttacaacaaatcctcaagcagatcgagaagcgatcgagagtatagataaagtt
ttttatggggatcaagaggccataaatccttacgaattagataatcttccagaagcttta
tcactgggtgatgttgaagttcgtcgagaaaagttacgccaacaagtaaatgcgatttca
aagaaactttccgacgttattttggaaaatcaaccatcctacacaaaagagttaaaagat
gttcaagaactgcaaagaagcctacataatgcttttattatatgtagcaacggcagaaga
tttctcatgtctgtaagcacacgttcaactacagctggactgaagttgcttgccagtcag
caaaaaaggcataacttgttggcgctgtgtactgctcttgaaacaatcagaacgcttcag
catactgatatacgacttcgtgagatgttggaggaggaagactatgatggcgcaatacaa
ctttgtcttgaatgccaaaaagcagcctctacttatcgccattaccactgtattaaagat
ctcagttccaaactacaagacactttggaacaaatagaggagcaaatggatgtagcactg
tctaagacttgcaaaacttttgatgaaaatgtctatgcaaagcttaaaattgcttaccag
ttgctaggaaagacacagtctgctatggaccaacttttaatgcattataccacctgcatc
cacaacacggcttttcatgttgttcttggttttgctgaacttggaagctctaaaaataac
ttacataagaagcaatacaaagacctttgcactcacatctcaggagaaatctacatacct
tgtctgatggagatgtgcaaagcattgtggagcataatgcactgttatcataaaacttca
gtctggcacaagaactgtatttctgctaatggtcttgatgtagcagaagaagtggaaaca
gaagaatatatcaatcgcaaattgtcgcatggacgccatcgcatttgggcagatgtccaa
tccagaattagaacttatattttgtcatgtgatttaagcgtttttaaatacgatgacttc
atcacagttcttgatattgtgaaaagatttatattagttggtgttgatttttgccgtaac
accattgatgaaacagagccccaaacaacaacggacaacctgaatgaaccactaaggaaa
caaactctttcctatttttacaatcaccataaatctagattggaagaattgctcatgttt
ttagataatgaagcatggcaaccctgtcctgttaaatcatcgtttgaagtcctaaacatg
caggaatttaaatttcttagacagcttgacgttgatgatgataatctttttgataataat
caagaaaattttgcttcaaatttgcctggcataaaatactttgatccatatacgaatgaa
agtcacccatttgctgatcttgaaaagatgagccaaaaagcaaatagtaatgacatacgg
caggttagatatgattcatatgaggctagtgatgaagatgatatggacgatgagctgcac
caggagtacattgatgaaagaactggagaatcacctgtgtctgacaatgcatctaaagta
cttcatgggccaatcatgaccaacactgcacttcacgttttgcgtttatgtggaagttac
ttgaaaatgtgtgatgttttgaaaccaattgccattgatgtggtagtctgcatgactcaa
ctatttgacctgtatttttatgcagtatttgaatttttctcaaccagccatgaaaaggag
aagtatcgttatgaaagacttacatcaacaattaaaagaatggaggaatctttatttctt
cctatttcaactaatgcagaaaatgaagcaactttgcctccgagttctgaaaaaattgct
cgacctacactttcacctgttgttgatctcaataagaatgaaaataattatgggataatg
gaaagaatagttgcaacagaatctttaatctgtttgtctgaacaatttcaatccttgcaa
aagtatttggaacttatgataccacagtcaaagaaagcatttttgcaccagttttattca
caaactgttagatcttcggcagatgtaagatggacttcttattgggaattttcatcacgc
tgcattaatatgacgtccacaatagaaaaaatgttcttagttaactgggatataaaagat
attatgtcacaacataatgcttatgtggatcagcttctgaaagaactgggtactttcaag
tcaagattgcagcagtcagtgcgatcggtccaaatgccagaagcagtaagcaaagtgata
tggaatcactgcattcgaatctccaaccaagtttttgttgaaggattctccaatgtgaaa
aaatgcagcaatgaaggaagagcacttatgcagctagactaccaacagtttttgatgaaa
tttgaaaaacttgctaatatcaggccaattccaaatcgtgagtatgtggaggcgtatata
aaggcctattacctcactgagaatgatttagaaaattggatgagaacacatattgagtac
actccaaagcaactttcttctttggtcaattgttctgctacttcatactccagtagcaca
gctgcatcaaccaatcgtaacgcaaaacagcgaatgatgtcattaatagaagaattaacc
atgagaaaatag
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