KEGG   Clavelina lepadiformis (light-bulb sea squirt): 143469529
Entry
143469529         CDS       T11416                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
clep  Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:clep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    143469529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clep03400]
    143469529
DNA repair and recombination proteins [BR:clep03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     143469529
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st DUF3337 WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_TEP1_C NBCH_WD40 Beta-prop_DCAF12 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_Vps41 WDR54 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_BBS7 RAWUL Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR75_2nd WD40_like
Other DBs
NCBI-GeneID: 143469529
NCBI-ProteinID: XP_076823379
LinkDB
Position
8:complement(16403018..16408776)
AA seq 695 aa
MTMQQRREPLGARKKIQVSFVIRDAAEKYNRSGVNALQLDRTSGRLFTAGRDSIIRIWDA
ETKDKDSDPYVASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHRGFCMSTLRTHK
DYVRTLAYAKHKEHVASAGLDKQIFIWDVNTLTALTTTRNTVTTSNVNGCKNSIYSVAMN
DSGTILVAGSTERAIRVWDPRTCDKRMKLKGHTDNVKALIVNRDGTQVLSGSSDGTIRLW
SLGQQKCIATVRVHNEGVWTLAALQDTSSFSFVYSSGRDGRIICTDFRNADFPNYLVCQE
DAPVLKLQLDDKEIPEKVYCCTANSHVNAWPLKPNDMNPAQGIQNEEFYEPECLKPYSMQ
PCYTIPGGSSITQYKVLSDKRYILTQDTENKVALWDVLTARCAEDLGTVDFDDEVKRREK
ILYVPNWFAVDLKLGMLSIHLEERECFSAWMTAKDVTGFEESDTVTKINYGGLLLHALLQ
HWPSTHHSVADQESTENDVADPATLQEKSLNHYLKVPPHTPVIFSEVGGRTLFRLLCADA
AGETEAMLLQETIPPWVLQAVIENKIATPFLKLSFFLQPHQSSGLKPNKSANSKLLANEM
LTVAKVMDHVHEKIICANDDTSQSSNNDNPAERSEESPSVADATEVNKDSVAAADNKVEL
LCADQVLDPEYNLRTVKYVFWKSGSDMILHYRLKT
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgacaatgcagcaacgaagagagcccttgggggctcgtaaaaaaattcaggtttctttc
gttataagagatgcagctgaaaagtacaacaggtcaggtgtcaacgccctccagctcgac
agaacaagtggaagactcttcacagctggtcgcgactccataattcggatatgggatgca
gagaccaaagacaaagacagcgacccctacgttgcatcaatggagcatcacacagattgg
gtcaacgacattgtgctctgttgcaatggcaaaaccttaatatctgcatcatccgacaca
actgtcaaagtttggaatgctcacaggggattttgtatgtctacgttacgtacacataag
gattatgtccgtacacttgcctatgcaaagcacaaagaacatgtggcgagtgcaggcttg
gataagcaaatatttatttgggacgtcaacactttaactgcacttactactacacgtaat
acagtgacaacatcaaatgtaaatggatgcaagaattccatttacagtgttgctatgaat
gacagtggaacaatccttgtggccggttccactgaacgtgctattcgcgtctgggatcct
agaacctgtgataaacgcatgaagctcaaaggtcacactgataatgttaaagctctcatt
gtaaatcgagatgggactcaggttttgtctgggagttctgatgggacaatccgcctttgg
tcacttggacaacagaaatgtattgcaaccgtaagagtccataacgaaggcgtctggaca
ctcgcagctctgcaggacacgtcttcttttagctttgtttattcttcaggccgagatggc
agaataatatgcaccgattttcgaaatgctgacttccctaattacctagtttgccaagaa
gatgcccctgttttaaagcttcagctagacgataaagaaattccggaaaaagtatattgc
tgcactgcaaattctcatgttaatgcttggccgttgaaaccgaatgatatgaatccggct
caagggatacaaaacgaagaattctacgaacctgaatgtttaaaaccctactcaatgcaa
ccttgctataccataccaggtggtagcagtatcacccaatacaaagttttatcggacaag
aggtacattctaactcaagacaccgaaaacaaagttgcattatgggatgtcctcacagcc
agatgcgctgaagaccttggcactgttgatttcgatgacgaagtaaaacgcagagagaaa
attctttacgtgccaaattggtttgccgttgacctgaagctggggatgctaagtatccac
cttgaagaaagagaatgtttttcagcgtggatgaccgccaaggacgtcacaggatttgaa
gaaagcgacacagttacaaaaatcaactacggtggattgctcctacacgctttgcttcag
cactggccttctacccatcacagtgttgcagatcaagaatcaactgaaaatgacgtggca
gatccggccacgttgcaagagaaatcgctcaatcactacctcaaagtcccaccacatact
cctgttatattcagtgaggttggcggaagaacgttattcaggctcttatgtgctgatgca
gcaggggaaactgaagccatgctccttcaagaaaccatcccaccgtgggttctacaagca
gtgattgagaacaaaattgccactccatttcttaaactgtcattctttcttcaaccacac
caaagttctggtttgaagccaaacaaaagcgcgaacagcaagctacttgctaatgagatg
ctcacggttgccaaggtgatggatcatgtgcatgaaaagattatatgcgcaaacgatgac
acttcgcaatcgtcgaacaacgacaaccccgcagagaggtcagaggagagcccgtcagtt
gccgatgcgaccgaagtcaacaaagattcagttgcggcggcagacaacaaagtagagctg
ttatgcgcggatcaagttttagatccagaatataaccttcgtactgtgaagtatgtgttt
tggaagagcggaagcgacatgatattacattatcgtctgaaaacctga

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