Clavelina lepadiformis (light-bulb sea squirt): 143469539
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Entry
143469539 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143469539 isoform X1
KO
K06823
collagen type XVIII alpha
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143469539
00535 Proteoglycans [BR:
clep00535
]
143469539
00536 Glycosaminoglycan binding proteins [BR:
clep00536
]
143469539
Exosome [BR:
clep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
143469539
Proteoglycans [BR:
clep00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
143469539
Glycosaminoglycan binding proteins [BR:
clep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
143469539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
DUF1554
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
143469539
NCBI-ProteinID:
XP_076823389
LinkDB
All DBs
Position
8:complement(4694565..4724757)
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AA seq
1272 aa
AA seq
DB search
MREFALVLVLLLLERGSSQAVFKDVTPQPIPTTHELNPNLPTESDRVTARSRSGCNVENC
LIDYHNAVYRTTPIFIRCHALRRLFVCMRKKSPGCAKDDARYMHIDEKRLLSVSMFNCDT
PSESSFSVVDLTTVISVPLASGVSFVQGFHGYPAFIIDDHPELSGSAKGLLPETLPNEFS
IRTSIKPGNRQGGFLFAVTNELQSVAKFALEIGPVPKDDDHMFIALYMSPSGPAAKVASF
QVDNFAGAWTRFAIEVSKDKITLFFNCAKVTEQIVVRNPMKELHFNPKDLVFVAGRGASF
FLDAYQGGLQELDLLSDPKKASEQCKDDEPTASLETEGSGSGDDIDTRSGELVDESGETD
DGDDGDLSFYITDETEEPTPTPPPIMTTEEAEEAEGAAAGEIEPIVQPSVIPVTHETTTT
RTVVEKEIVEVAGPRGEKGEKGAQGESIVGPEGRSGRDGLDGATGRPGEPGLTGADGLRG
EQGIQGEPGQKGDKGEAGTGIQGEQGEQGEKGEPGEASVVTGSAGPVGPSGPQGEKGEKG
DPGEDGDDGEDGDDGEDGEDGEKGDRGLPGKAIVGPPGPPGVSSFVDMEGSGFEGQQGPP
GPIGPKGDTGAPGADGVGIKGDKGDQGERGLDGQPGIPGKDGRIGVDGQQGPLGPVGAVG
QKGEPGKDGFPGLAGVPGPPGPAGVCNAPSAKMPTDDEDLFEGSGKVDLPKVMSGCSAGP
PGENGAPGLPGPHGPAGPVGPQGPTGPDGAQGVPGAEGPSGENGKNGAPGLQGAPGNDGA
QGLQGPAGKDGADGAQGPAGLPGKDGESVTGPKGDSGAPGSEGPIGPPGPPGPAAAVGST
EGLKGEKGEPGNMIGPDGSMLHGSGEKGEPGNPGERGPNGLPGMQGIKGDMGMPGRRGAP
GRDGLRGGQGDKGEYGERGETGAQGLKGEPGTPGTGGIFGGSAEKGDQGMPGRPGTPGPR
GNPGVAGPQGLQGESGLRGFKGEPGQQASSGAPSSLTFNTLDEMQDNFATSPLGILAFVI
ARDEMYVKTSAGWSGVQLTRPLTPPGSQRPVRPTRKSTTTTTTTTTTAATTTTTTTEAPT
TTTTTTTQQPLSNKRLHMIALNFPLSGRMGGIVGADRLCFEQAKDAGLRGTYRAFLSSRD
QHVSSIVRRQDRENVPIVNAKGEILFPNWNSIFNGSMGDFHDPEKIYSFEQRRILTDARW
PVKAIWHGSSPDGSVNSHHYCVSWYTQNMAVTGAGASLRNHRLLAHKPLSCHRSFAVLCI
ENSTRTLRYRKR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtttgcgctggtacttgtccttctacttttggagcgaggctcctctcaagct
gtgttcaaagacgtcacgccccaaccaatccccaccacccatgaacttaaccctaacttg
ccgacggagtcagatagggtaacagcaaggtccagatccgggtgcaatgtagagaactgt
ttgattgattaccacaatgccgtgtaccggacaactccaatttttatacgttgccacgcg
ctccgtcgtctctttgtatgcatgaggaagaagtcaccaggttgcgccaaagacgacgcg
cgctacatgcatatcgacgaaaaaaggcttctgtcggtgtccatgtttaactgcgacaca
ccatcagaatccagcttttctgtggttgacctcactaccgtgattagcgtacctctggcg
tcaggagtatcattcgtgcaaggattccacggctaccctgcgtttatcatagatgatcac
cctgagctcagtggctcagcaaaaggcttactacctgaaactctgccaaatgaattctcc
attagaacgtctataaagcctggaaaccgtcagggtggattcttattcgcggttactaat
gagcttcagtcggtcgccaagtttgccttggaaatcggtccagtgcccaaggacgatgac
catatgtttatcgcactatatatgagtcctagtggccctgcagccaaggttgcttcgttt
caggtggataactttgccggtgcctggacacgtttcgccattgaggtatcaaaagacaaa
ataactttatttttcaactgcgccaaagtcaccgaacaaatcgtcgtacgaaaccctatg
aaagaattgcacttcaatcccaaggatctggtatttgttgctggaagaggagccagtttc
tttcttgacgcgtaccaggggggtctgcaagagcttgatcttttgtccgatccaaaaaag
gcatcagagcagtgcaaagacgatgaaccaaccgcttcgcttgagacagaagggagtgga
agtggcgatgacatcgatacgagaagcggggagctcgttgatgaaagcggagagacggat
gatggggatgacggtgatctgtctttttacatcactgacgaaacggaagaaccaactcct
actccacctccaattatgacgactgaggaagctgaggaagcagaaggagcagccgcagga
gaaattgagccaatcgtacaacccagtgtgatcccggtcacacatgaaactacaacaaca
agaaccgtggtggaaaaagagattgttgaagttgctgggcctagaggtgagaaaggtgag
aagggagcacaaggagagagtattgttggaccagaaggccgttcaggacgtgatggtttg
gacggcgccactggacgtcctggagaacctggtttgactggtgccgatgggttgcgtggg
gagcaaggcatccagggcgaacctggccaaaaaggagataagggtgaagctggaaccggc
atacaaggcgaacagggtgaacagggtgagaaaggtgaaccgggtgaagcatctgttgtt
accggctcagctggaccagtggggccatctggaccacaaggcgaaaagggtgaaaaaggt
gatcctggtgaagatggagacgacggagaagatggagacgacggagaagatggagaggac
ggagaaaagggcgaccgtggcttacctggcaaggccatcgttggacctcctgggccaccc
ggtgtttcgtcatttgtggatatggaaggatccggttttgaaggacagcaagggcctcca
ggaccaattggacctaaaggtgacactggtgcaccaggtgctgatggtgtaggaatcaag
ggagataagggagaccaaggtgaacgtggcttagatggccaacctggaataccgggcaag
gacggaagaattggtgttgacggacaacaaggacctttaggaccggttggtgccgtaggg
caaaagggcgaacccggtaaagatggtttccctggtttggctggagtaccgggaccacct
ggcccagctggtgtttgcaacgctccatctgctaaaatgccaacagatgacgaagaccta
ttcgaaggaagcggaaaagtcgatctacccaaagtaatgtcaggttgttcggcaggacca
ccaggagaaaatggagcgccgggacttccaggacctcatggacctgccggcccagttgga
ccacaaggacctacgggtccagatggagctcagggtgttcccggtgctgagggcccgtca
ggcgaaaacggtaaaaatggagcacctggtcttcagggtgcccctggtaacgatggtgca
caaggactacaaggaccagctggcaaggatggagctgacggggctcaaggtcctgctggt
ctcccaggcaaggacggcgagagcgttactggacctaaaggcgacagcggcgcaccgggg
tcagagggacctattggaccaccaggacctcctggtccagcagccgcggttggttccact
gagggattgaaaggtgaaaagggcgaaccaggaaatatgattggaccagacggaagtatg
ctgcacggaagcggagagaaaggagaacccggtaaccctggagaaagaggtcctaatggc
ttaccgggaatgcaaggtatcaagggtgacatgggaatgcctggacgacggggggcacct
ggaagagatggtcttcgcggaggacaaggagataaaggagaatatggagagagaggtgaa
actggtgcacaaggacttaagggagaacctggaactccagggactggaggaatatttgga
ggctccgcagagaaaggtgaccagggtatgccaggaagaccaggtacaccaggtccaaga
ggaaatcctggtgttgcaggacctcagggcctacagggagaatccggtttacgcggattc
aaaggtgaaccaggacagcaagcaagctcaggtgctccatcaagcctcactttcaacact
ttggatgaaatgcaagataactttgctacttctccactcggaattctagcctttgtcatc
gctagggacgagatgtacgtgaagacgagcgccggttggagcggggtgcagctgactcgg
ccattaacgccaccgggatcgcagaggccagttagacccacaagaaaatccacgacgacg
acgaccaccacaaccaccaccgccgcaacaaccacaacgacgacaaccgaggctccaaca
accacgaccactacaacaacgcagcaaccactttccaacaagcgactgcacatgattgcg
cttaacttcccactcagtggacgcatgggcggcatcgtcggggcagatagactctgcttc
gaacaggctaaggatgcaggtctacgtggaacttacagagctttcttgtcctcgcgcgac
caacacgtcagttcgattgtacgtcgccaagatagagaaaatgtaccgatcgtcaacgct
aagggtgaaattctcttccccaattggaattctatctttaatggcagcatgggcgatttc
catgaccctgaaaaaatatattcttttgaacaacgacgaattctaacggatgctagatgg
cccgtcaaggcgatatggcatgggtcatccccggatggaagtgtgaacagccatcactat
tgcgtatcctggtacactcaaaatatggcagttaccggcgccggtgcatcgttacgaaac
catcgtttgctggctcacaagccgctcagctgtcacagatcatttgctgttctttgcatt
gaaaacagtaccagaacgctacgatacaggaagagatga
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integrated database retrieval system
