Clavelina lepadiformis (light-bulb sea squirt): 143469775
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Entry
143469775 CDS
T11416
Name
(RefSeq) uncharacterized protein LOC143469775 isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143469775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clep03021
]
143469775
03019 Messenger RNA biogenesis [BR:
clep03019
]
143469775
Transcription machinery [BR:
clep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143469775
Messenger RNA biogenesis [BR:
clep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
143469775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
143469775
NCBI-ProteinID:
XP_076823700
LinkDB
All DBs
Position
8:complement(2588702..2606310)
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AA seq
609 aa
AA seq
DB search
MASNGSQQGYMASGGQSQQYNYGQVNKSGQQQNPSVGGYQGYSQYPQGGDGQQYGGYTQQ
SMGAQSQSGYGTQQTQSASYTQSGSYGKQPASSGGQSQQPGYGQAQGQQSGGSYGQDSSG
SGYSQRTGGYGQNQQPSASYGQSQQSASASYGQSQPSASASYALSQQSGGYGQTKESQAG
YGQGQTGYSGRGASQSGGYGQSQQQSGSSGYGRGGQQQPSSGGYEQGQGQLGQSNGGGFG
WQHQSGGYDQGPRGQYGQVMPSGGYEGGPQQSAGYGQGPQGQYGQAGKDWNQSNRGGYGQ
GGPRDGGRGGGGGYGAGRGGPGMGGSRGRGVGSDSRGRGSFGGDRGGFRGGDGSDRGRSG
DSGGYNRQSAGGGGGYGPSQVDTTPGPESDTIFVQGLGEEITKEKIAEYFGQIGIIKKDK
RTQEPRIYVYMDKTTNTPKGECTVTYDDPPSAKAAIQWFNGKEYSGSTLSVSFAQQRSGG
GSGAGAGAGGGPRGRGGRGFGGRGRGGDRGRGGGRRDFGDRGGGRFGGGGGYGGDDGGRD
RGGFRGGRGGDRGGRGGGFGGDRGGRGRGGYDGGRGGYGGDRGRGGGDRRDGGGKWRGGG
SGGGRSGPY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaatggcagtcagcaaggttacatggcgtctggtgggcaatcacaacagtat
aactatgggcaagtgaataaaagcggccaacagcaaaatcctagtgtcggtggatatcaa
ggttactcacaatatccacaaggaggtgatggtcagcaatatggtggatacactcaacaa
agcatgggtgcccaaagccagagtggatatggtacccaacaaactcagagcgcttcatac
acacaatcaggcagttacggaaagcagcctgcaagctctggtggccagagccaacaacct
ggttatgggcaagcacaaggacagcaatctggtggtagttatggtcaggacagcagtggt
tcaggctacagccagcgaactggtggatatggccaaaaccaacagccatctgcctcatat
ggacaaagtcaacagtctgcgtctgcttcatatggacaaagtcagccgtctgcatctgct
tcatatgcactaagtcaacagtctggtggatatggccaaactaaagaaagtcaagctggg
tatggccaaggacagactggttattcgggtcgtggagcatcgcagtcaggtgggtatggt
caaagccaacagcagtctggttccagtggttatggtcgtggtggtcagcaacagccatca
tctggaggatatgagcaaggacagggacagttaggacagtccaatggtggtggtttcgga
tggcaacatcagtctggcggctatgaccagggtccgagaggccagtacggccaggtaatg
ccgtctggtggttatgaaggaggaccacagcaatctgctggatacggacagggcccacaa
ggccagtatggccaggctggcaaggattggaatcagtcaaacagaggaggatacggccag
ggagggcctagagatggtggtaggggtggaggaggaggttatggtgccggaagaggcgga
cccggcatgggtggcagccgaggaagaggagtcggttctgatagcagaggaagaggcagt
tttggaggtgataggggtggattccgcggaggagatggcagtgatcgtggaagatctggc
gattcaggtggatacaacagacaaagcgcaggtggaggtggtggatatgggccgtcacaa
gtagacaccacaccgggaccagaaagtgacacgatctttgtccaaggacttggtgaggaa
ataaccaaagaaaaaattgcagaatatttcggtcaaattgggattatcaagaaagacaag
cgtacccaagaaccacgcatctatgtctacatggacaaaacgactaacacgccaaaggga
gaatgcacagttacttacgacgacccaccatctgctaaagccgcaattcagtggtttaat
ggaaaggaatacagcggctcaacattgagtgtcagctttgctcaacaacgatccggaggc
ggcagtggtgctggtgctggtgctggtggcggtccacgaggtcgtggaggaagaggattt
ggaggacgaggacgcggtggtgaccgcgggcgtggaggaggacgccgagatttcggagat
cgcggaggtggaagatttggtggaggtggtggatatggtggagatgatggtggaagggac
agaggaggattcagagggggaagaggtggggacagaggaggcagaggtggtggttttgga
ggagacagaggcggaagaggaagaggcggctacgatggaggtcgcggcggttatggagga
gatcgtggcaggggaggcggagacagacgtgacggcggaggaaaatggaggggaggtggt
tctggtggcggaagatcaggaccttactga
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