Clavelina lepadiformis (light-bulb sea squirt): 143469869
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Entry
143469869 CDS
T11416
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
143469869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clep03400
]
143469869
Enzymes [BR:
clep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
143469869
DNA repair and recombination proteins [BR:
clep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
143469869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
143469869
NCBI-ProteinID:
XP_076823848
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All DBs
Position
8:6137989..6145932
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AA seq
464 aa
AA seq
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MHVSYNSSVPFCSCFYHIYSLNLQQRQRSIEFVTKSKMHMIIARHENFQKTNIVYMLCKV
RNLVCANYKYYYPLTKNTNTSAFIELCLWSITTRMSNNVCHLSSTEWGTIDCKANNLQLD
TNLTCGQAFRWRHFNDDGPTMIGVFSHRVWQLKQTSNFIHFRVLACSHWSIKVVPISDQS
DTPGSKALKRRKLSSPKKCSYKDTKNTRLCGCHLREKEILIKYLQLEINLHELYQQWSMK
DKQFLGVSKKFPCVRVLNQEPLETLFSFLCSVNNSISRIVPMVERMCQKYGDKLLDFNGF
EFYDFPSLNKLAQANTDKELRQLGFGYRAPFISQCAKKVLQNGGEEWLSSLENQSYEDAM
SQLIQLPGVGMKVADCICLMALNKSCAVPVDTHVRQIAVRDYGYNIKAKSLTSKAYKDIG
GFFRSMWGPYAGWAQAILFVADTKPLPSLYTLSKNLDKEIHTQK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtcttataacagttcagtaccgttttgtagttgtttctaccacatatatagt
ttaaatttgcagcaaagacaacgtagtattgagtttgtcacaaaatctaagatgcacatg
attattgctaggcatgaaaattttcaaaaaactaatattgtatacatgctttgcaaagtt
agaaatctggtttgcgctaactataagtactattatccattaacaaaaaatacaaatact
tctgcatttattgaactctgtttatggagtataacaaccaggatgtccaacaatgtttgt
catctgagttcaactgagtggggtactattgactgtaaagcaaacaacctgcagctagat
acgaacctgacatgtggccaagcatttcgatggagacattttaatgatgatgggccaact
atgataggagttttttctcacagagtttggcaactcaaacaaaccagtaactttatacat
tttagagtgttggcatgttctcattggtctattaaggtcgttcccatctcagatcaaagc
gatactccaggatccaaagcactgaagaggagaaaattaagttcaccaaaaaaatgtagt
tacaaagacacaaaaaacacaagattatgtggatgccatttaagagaaaaggaaatctta
ataaaatacttgcaactagaaattaatttgcatgaattatatcaacagtggagcatgaag
gacaaacaatttctgggtgtttctaagaaattcccatgtgttcgagttttgaatcaggag
cctcttgaaactttattctcatttttatgctctgttaacaactccatttcaagaattgtc
cctatggttgaaagaatgtgtcaaaaatatggtgacaaacttttagatttcaatggattt
gaattttatgatttcccatcgttgaacaagttagctcaagcaaatactgacaaagaatta
agacaacttggttttggttacagggcaccattcattagccaatgtgccaagaaggttttg
caaaacggcggtgaggaatggctttcttctcttgaaaaccagagttatgaggacgcgatg
tctcaactcattcagctgcccggtgttggaatgaaagtggccgattgcatttgcctgatg
gcacttaataaatcttgcgcggtaccggtagatacacatgttagacagattgctgtgagg
gattatggatacaacattaaagcgaaatccttgacaagtaaagcttataaagatattggt
ggttttttcagatcgatgtggggtccttatgctggttgggctcaagcaatactgtttgta
gcagacacaaaaccgttgccttctttatacacgttatctaagaatttagataaggaaatt
catacacagaaataa
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