Clavelina lepadiformis (light-bulb sea squirt): 143469881
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Entry
143469881 CDS
T11416
Name
(RefSeq) integrin alpha-1-like isoform X1
KO
K06587
integrin alpha 11
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep04512
ECM-receptor interaction
clep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143469881
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
143469881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clep04515
]
143469881
Cell adhesion molecules [BR:
clep04515
]
Integrins
Integrin alpha subunits
143469881
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
143469881
NCBI-ProteinID:
XP_076823867
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Position
8:6464467..6491380
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AA seq
1361 aa
AA seq
DB search
MKVHAYHRKVGLFIKFMHLVVLFQMERTEAFNILVDGHTENVFVRKDEVNSFGETNREFN
GDSFFGYNIFLQLINNGFEDTIQFATGAPTEMLQSYKNSNTEEGGLIKEPSPQLRAAVSS
TDAMGELYYCETSQLHFMNTTHFRIHNCTRNANIDRQLAGFELSNQDALGISLSSFPLKK
TGQSLSTANTMVTCAHLREHDCGTNYKAEGACYVSETVPGRGDSQKITQWQKRVPCRHSC
FEKDIDLMFVVDGSFSVGNESFNKVKNWIKDVSEGFEIAKQVQVGVVQYSFWYANKKDQT
YMTTEIALGQYKDKKQFDDAVDSIKYHGYSTYTAHAINKTIKEDFNGPASRYPDARRVMI
LLTDGNADDAELLGGATKYAADQDVESFAVGVSQYRLDQLELIATSPGNVITVDDFDDLT
NIVSELQKGIQIMEGAASPDIHNELMQCQAGISTAFDKNGALYLGAVGAYDWSGTVIKYD
SSNDEEASIPSYEEVQRVLPDRAKESYLGYSVTSGRFNGGSVQYVASGAPRYMLEGAVVV
YESVVASANFDNSQTLRAHESQRQLGSYFGGSVLALDVNNDNKDDLLVGAPLYTGEGFDE
GRVFVFVTKSGTYPADWASSSEPPLELVSIAPGGRFGTTMASAGDLNKDGYNDVIIGAPL
SEGDRGSIFIYHGSADGIDTGYKQKISASDITGTNLFYFGQSIQGGVDLDGNQYPDVAVG
APKSDTVVIFRSRPVAVLNGTVEFTTDSISILDCFKIENRQCVKVTACITVTGEGIEDNI
EVNYTLNLDTRALNKRIEFRTIANSTQSGYGTLNYNMTIETGTPACETYDVYVKQTVEDY
FSEPLVAELDYALSPRHLQQPLSSISDPSLDYKATDEAEFASSCAGPTCNYDLRLAGSIT
VPNATLNGVDLTDGGNVIIVGSDSGQVTVRMNFSNHAEVAFGARVTVTYPARLSWSNVAG
FESSNPTFKQPCVADQEGPQNGTYLSRILNYQYDSQRGNIMTNDDWCYFVFKFSLSNLRD
GDIVDQVDIRIAADTIRAGVDRNKNDNEIDFSKMVKYRADATVQRQPITPSIVFDFDDST
EPITSVRQIGVNTSDVQYPLEITGRGYANIPFSTITLSYPSILPLPEGSTGPFHLLYLYE
LTCESRTGGNAACECDVSNVNRYDLSINLVAQDNATGPSVNYTSYPKKFGLQTSFDCSTD
NPPQGYVCEMINCNITNLSQNSKISFVANFRAWTKSFNLPNRTASVQLISGFRFSTENSR
LLINNAGNNVTIDNKALSTTVTLRPGEQPGSEDNPIWIYILAAIGGLLLLIVIVVILWKL
GFFKSKYANMKQEALEWNDANGGADGGAPNGDESTADMVGS
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgcacgcataccacagaaaagttggattatttattaagttcatgcaccttgtt
gtcttgtttcaaatggaaagaacggaagcgttcaacattttagttgatggccacaccgaa
aatgtatttgtgcgcaaggacgaagtgaattcattcggagagacaaatcgagagttcaac
ggagattcattttttggatataatatttttttgcagcttattaataatggatttgaagac
acaatacaatttgccacgggcgctcccactgaaatgttacaatcatataagaacagcaac
acggaagaaggtggactaatcaaagagcccagcccacaattgagagcagctgtgtcatcc
actgatgcaatgggagagctgtactattgtgaaacatctcagctacatttcatgaacacg
acacattttcgaatacacaactgtacaagaaatgccaacattgatcgtcagctggctgga
tttgaactgagtaaccaggacgctttgggcatttcattatcaagctttccgttaaaaaag
actggccaatcgctgtcgactgcaaacaccatggtgacgtgtgcccatctgcgtgaacat
gactgtggtacaaattataaagcggaaggtgcttgttatgtttctgaaactgtcccagga
cgaggtgattcgcagaagataacccagtggcaaaaacgtgtcccatgcaggcacagttgc
tttgaaaaggacatagatctcatgtttgtggttgatggatcattttctgttggcaatgag
agttttaacaaagtaaaaaactggatcaaagacgtctctgagggttttgaaattgccaaa
caagtccaagtcggagtggttcaatattcgttctggtacgcaaacaaaaaggaccagaca
tacatgaccacggaaatagctctcggacagtacaaagacaaaaagcaatttgacgatgca
gtcgactctatcaagtaccacggatacagcacatacacagcccatgcaatcaacaaaact
ataaaagaagattttaatggtccagcaagtagatacccagacgctaggcgagtcatgatc
cttttgactgatggaaatgctgacgatgcggaattgcttggtggtgcaacaaaatatgct
gctgatcaagatgtcgaatcattcgcggttggtgttagtcaatacagacttgaccagtta
gagctcattgccaccagccccggcaacgtcatcactgtcgatgattttgatgacctcacc
aacatcgtatctgagcttcaaaagggcattcaaattatggaaggtgctgcgtcgccggat
atccataatgagctgatgcaatgccaggctgggatatcaaccgcctttgacaagaatgga
gctctttacttgggagccgttggagcatacgactggagcggaaccgttataaaatacgac
tcttctaacgacgaagaagcatccattccttcgtatgaagaggttcagagagttttgccc
gatcgagccaaagaatcttacttaggttattctgtaacatctggaaggtttaatgggggg
agtgtgcagtatgtggcgagtggtgcaccccgctatatgttggaaggagctgtggtcgtt
tatgagtcggttgttgctagtgcaaactttgacaattctcaaacacttcgagcgcacgag
agccagcgacagctcggaagctattttggcggctcggtactggctttggatgtaaataac
gataacaaagatgaccttctggttggtgcacccttgtatactggagaaggctttgatgag
ggtcgagtgtttgtctttgttactaaaagtggcacctatccagcagattgggcttcgtcc
agcgaacctccactggagttagtatcaatcgcacctggtggtcgcttcggtactacaatg
gcttcggccggtgatctgaacaaagacggctacaatgacgtcatcataggtgctcccttg
agcgaaggcgacagaggatccatctttatctaccacggaagcgcagatggcattgatacg
ggatataagcagaaaatttctgcatctgatatcaccggaacaaaccttttctattttggc
caatctattcaagggggggttgatttagatgggaatcagtacccagatgtggcagttggt
gctccaaagagtgacacagtggtcatatttaggtcacgccctgttgcagttttgaacgga
acagttgagttcactacagattcgatatctatactggactgctttaaaatagagaaccgt
caatgtgttaaagtcacagcctgtattactgtgactggtgaaggaattgaagataacatc
gaagtgaattacacgctcaatttggataccagagctctgaacaaacgaattgaatttcga
accattgccaattccacacagtctggctatggaactttaaactacaacatgaccattgaa
acaggaacaccagcatgtgaaacttacgacgtttacgttaagcaaaccgtagaggattac
ttttcggagcctctagttgcggaattggattatgctctttcaccgagacatttacagcag
ccactttcttccataagtgatccctctctagattacaaggcgacagatgaagctgaattt
gcaagttcttgtgcggggcccacatgcaattatgatcttcgactagctggttctattact
gttccaaacgcaacacttaacggtgtggacttgacagatgggggcaatgtgattatagta
ggttctgacagcggacaagtgacagtcagaatgaacttcagcaaccatgcagaggtcgct
tttggcgctagagtgacagtcacttacccggcccgactcagttggtcgaatgtggcaggc
ttcgaaagctctaatccaactttcaaacagccgtgcgttgcagaccaagaaggtccccaa
aatggaacatacttaagccgaatactcaactatcaatacgacagtcaacgtggcaacatc
atgacaaatgacgactggtgctactttgtgttcaaattttcgttgtccaatttacgtgat
ggagatattgtggaccaagtcgacattcgtattgccgccgacacgatacgagcgggtgtg
gatagaaataagaatgacaacgaaattgactttagtaaaatggttaagtatcgagcagat
gcaacagttcaaaggcaacctattactccatctatcgttttcgattttgacgattcaact
gaacctattacatccgtcaggcaaatcggagtgaacacttcggatgttcaatatccattg
gagatcaccgggcgtgggtatgcaaatattcctttctcgacgataaccctgagttacccg
agcatcttaccgctacccgaagggtccaccggcccattccatttgctttatttgtatgag
cttacttgcgaatctagaacgggtggtaatgcagcctgcgagtgtgacgtatctaacgtc
aatagatacgacttgagtataaaccttgttgctcaagacaatgctactggaccaagcgtg
aactacacttcgtacccgaaaaaatttggcctgcagacatcattcgattgttccactgac
aatccaccacaaggctacgtgtgtgaaatgataaactgcaatataacaaacttgagtcaa
aacagcaaaatttctttcgtagctaacttcagggcatggactaaaagttttaatcttccg
aaccgcactgcaagcgtacagttgatatccggattccgattcagcactgaaaattctcgt
cttttgataaacaacgcaggaaacaatgttacgattgataataaagcgttgtccactaca
gtcacacttcgtccaggtgaacaaccgggtagcgaagacaacccaatatggatttacatc
cttgcggctataggaggacttctgcttcttattgtcattgtagttattttgtggaaattg
ggatttttcaagagcaaatacgcaaacatgaagcaagaagccctggaatggaatgatgca
aacggaggagccgatggtggagcaccaaatggcgacgagtcaacagctgacatggttgga
agctaa
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