Clavelina lepadiformis (light-bulb sea squirt): 143470162
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Entry
143470162 CDS
T11416
Name
(RefSeq) integrin beta-1-B-like isoform X1
KO
K05719
integrin beta 1
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Pathway
clep03271
Virion - Rotavirus
clep04145
Phagocytosis
clep04512
ECM-receptor interaction
clep04517
IgSF CAM signaling
clep04518
Integrin signaling
clep04820
Cytoskeleton in muscle cells
clep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
143470162
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
143470162
04517 IgSF CAM signaling
143470162
04518 Integrin signaling
143470162
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
143470162
09142 Cell motility
04820 Cytoskeleton in muscle cells
143470162
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
143470162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clep04131
]
143470162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clep04147
]
143470162
04515 Cell adhesion molecules [BR:
clep04515
]
143470162
04090 CD molecules [BR:
clep04090
]
143470162
Membrane trafficking [BR:
clep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
143470162
Exosome [BR:
clep04147
]
Exosomal proteins
Proteins found in most exosomes
143470162
Cell adhesion molecules [BR:
clep04515
]
Integrins
Integrin beta subunits
143470162
CD molecules [BR:
clep04090
]
Proteins
143470162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
EGF_integrin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
143470162
NCBI-ProteinID:
XP_076824218
LinkDB
All DBs
Position
1:complement(21635454..21642429)
Genome browser
AA seq
869 aa
AA seq
DB search
MDKTSLSVVCYIEMTMLFLLLTLCLVSCQMSEADISRKCAAAQDDCGQCISAHPSCSWCV
DDQDEHSQVTDRCRTAAESTKACANFINPVFIKQETRNMEFSVVDDPTATNVNVIQVKPQ
EQNVKLRIGETAKVNITFKKVVESPLDIYYTMDLSLSMSDDLEYLKTLAVDLVDHIQSNV
TNNIGVGFGTFVDKVVLPYASEDQAVLDKVCGDDQTCQLPFGFRHQLSITGNSTNFEGAV
LETVISANLDTPEGGFDALMQIAVCENIIGWRPGALRVILLTSDAISHSAMDGKLGGILD
ANDMACHLIPEASGHSHIYSKSQEQDYPSIGQLKEVFQRNKIQAIFAVTNDTYDAYKDFP
NLLPSYVGVLDGSSRNIFPIISNAYDQIKSQFAMTAPIPPEGLEMNHRTLCPRTSTWKEN
SLECDNIALGDEITFQFDLLATACPNILGHVDKVEFISSFVQDVVSINIDYHCDCDCAVF
DSGNSSSCNNHGDLMCGVCQCSDGKGGSHCQCDTSASNSELLQSCTDQSSSSEALCNNHG
LCECGACECEKGFFGNLCQCKSSDCPTDEKGLECGGELQGHCENCYGDRRCICNETGGWT
LNKANSVCSCHDDKCKAHPGEEVCNGNGDCICDTCECYEDSFYWTGRYCNQCVHPDCSNL
NGTCSNMQLLSCADCVYKNGRVDSCLEYCEQLGIESKTLTSLPDCKNCAVSPSEEDCNHC
NSLNEDLFSSIVCERIQENDQCLMSYKIGWDNDRNNFVVLIKTRNVLVDCPQPIEPIIII
MPVVGTILIGGIIAMLVWRHFKTKWDKKKYEEFLNEISKSKWNAVDNPIHQTPAQRFVNP
NYIESDDFSLSKESKHGKPDLLTFMQTAD
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacctctctttccgtcgtttgttacattgaaatgacgatgttgtttttgttg
ctaactctttgcttggtgtcatgtcaaatgtctgaggctgatatttcacgcaagtgtgca
gcagcgcaagatgactgtggccagtgtatatcagcacatccaagttgtagctggtgtgtc
gacgaccaagacgaacactctcaagtgacggatcgctgtcgcacagctgcagaaagtaca
aaagcttgtgccaatttcatcaaccctgtcttcatcaagcaagaaactagaaatatggaa
ttttcagtcgttgatgaccctacggcaaccaacgttaacgtcatccaagtcaaacctcaa
gagcaaaatgtcaaattacgaattggagaaacagccaaagtgaacataacatttaaaaag
gttgtcgaatctccgctggatatatattacacaatggatttgtcgctttccatgagtgac
gatttagaatatttgaagacactagcggttgacttggtagatcatatacagagtaacgtg
acaaacaatattggagttggattcggcacttttgttgataaagtagtactcccttacgca
tctgaagaccaagccgtacttgataaagtgtgcggagacgaccaaacatgtcaattgcct
ttcggatttcgtcatcagctcagtattacaggaaacagtacgaattttgaaggagccgtc
ctagagaccgttatatctgccaacctcgacacgccggagggagggtttgacgcgctcatg
cagattgctgtttgtgagaatatcataggctggcgtccgggagctctccgtgttatcctt
ctgaccagcgacgcaatttctcacagtgcaatggacggaaaacttggcggtatacttgac
gctaacgacatggcgtgccacttaataccggaggcaagtggtcattcccacatctattcg
aaaagccaggagcaagattacccatcgattggtcaattaaaggaagtctttcaaaggaat
aaaatccaagcgatatttgctgttactaacgacacgtacgatgcatacaaggattttccc
aaccttcttccatcttatgtcggtgtattggacgggagctcaaggaacattttccccatc
atttccaacgcctatgaccaaatcaaaagtcaatttgcaatgactgcacccataccgccg
gagggtttagaaatgaatcacagaacactttgtccgcgaacttcgacatggaaagaaaac
agcttggaatgcgacaacatcgcactgggagacgagataactttccagtttgatcttctt
gcaactgcttgtccaaatattcttggtcacgttgataaagtggagtttatatccagcttt
gttcaagatgttgtctcaataaatatagattaccactgcgactgcgattgtgctgttttc
gattcaggaaacagttcttcttgcaacaatcacggagatttaatgtgcggagtatgccag
tgctctgatggaaaaggaggctctcattgtcaatgtgatacttctgcgagcaactcagaa
ctactacagagctgtacagatcagagctcttcttccgaagccctttgcaataatcatggc
ttatgcgagtgtggtgcttgtgaatgtgagaaagggttttttggaaatttatgtcaatgc
aaatctagtgactgtcccaccgatgagaaagggctagaatgtggaggagaactgcaaggc
cattgcgaaaattgctatggagatagaagatgtatttgcaacgagaccggaggctggacg
ttgaacaaagcaaacagtgtatgttcttgccacgatgataagtgcaaggctcatcctgga
gaagaagtttgcaatggaaatggtgactgcatttgtgacacctgcgaatgctatgaagac
tcgttttattggacgggaaggtattgtaaccagtgcgttcatccagactgctctaaccta
aatgggacctgttccaacatgcaactcctctcgtgtgcggattgcgtttacaaaaatggg
agagtagattcgtgcttggagtactgcgaacagcttggaatcgagtctaagaccttaaca
tcgttgcctgactgcaaaaactgtgccgtatcgccctcagaggaagattgtaaccactgt
aacagtttaaacgaagacctattctcgtcaattgtctgcgaacgcatacaagaaaacgat
cagtgcctcatgtcctataagattggttgggacaacgatcgaaataattttgttgttttg
ataaagacaagaaacgtcttggttgactgcccacaaccgattgaaccaatcattataatt
atgccagtagtgggcacgatactcattggtggtataattgccatgcttgtatggaggcat
ttcaaaactaaatgggacaagaagaaatatgaagaatttttaaatgaaatttccaaaagc
aaatggaacgcggttgacaaccccattcaccagacccctgctcaacgctttgtcaatcca
aactatatagagagcgatgatttttccctgagcaaggagagtaaacatggtaaaccggat
ttgcttactttcatgcaaactgctgactga
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integrated database retrieval system
