Clavelina lepadiformis (light-bulb sea squirt): 143470573
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Entry
143470573 CDS
T11416
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05041
solute carrier family 6 (neurotransmitter transporter, creatine) member 8
Organism
clep Clavelina lepadiformis (light-bulb sea squirt)
Brite
KEGG Orthology (KO) [BR:
clep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clep02000
]
143470573
Transporters [BR:
clep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
143470573
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
143470573
NCBI-ProteinID:
XP_076824914
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Position
1:20397643..20401943
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AA seq
587 aa
AA seq
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MGMNSLSDKPRQTWRKRWDFILSSAGVCIGLGNIWRFPYLCFKYGGGAFLLPYWLSVIVL
AIPLLILDISLGQSIQKGVIASWSTVPIFKGIAFACATMIFHSNLSYPIILVWVSKYLVS
SFNSRLPWATCDNEWNRDGCVGIDIVTGVSNTSAFNTTSAISILTNVTNQTQTMSSAEQF
WNYEVLEISSGLEELGSLRLDLVLYLGLIWILGYLAIFKGIKWSAKVVYFTATVPIVLIL
VVVVRGATLEGASLGIYHYLTPNVTLLKDTEVWVGAATQVLYSFCVATGSLTTLGSYNKY
NQNFLKDILMIVLSNCLASFLCGFAVFSTLGSMAHAQNQTMDEVAQSGPGLIFIVYPQAL
TFLPLPQFWNAIFFLTIFLMGFDSQLIYVEAFCALFLDYFRPLRTFHKYSRPIFLAFGCL
GFYLSGLIFVTKGGVYVFEIFNTYGMAGWSLFFIAACECIAIGWVYGAHRHWDEINRMIG
PSKIRPVIIFIWKYVGPILCVLVSIYYVAVHSRMTYGNYIYPPWAQVLCHFVSASSALWI
PLYAVYITIVSGKSWRELRRQENSKKPMIGEEMPGKCFDNDEEVEML
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaattctttgagcgacaaaccgcgacagacttggcgtaaacgctgggatttt
attctatcgagcgcaggagtgtgcattggcttgggaaatatttggaggtttccttatctt
tgcttcaaatatggtggaggagcgtttcttctgccctattggctatcagtaatagttttg
gctattccgttactgattcttgacatttcgctgggacaatcaatccaaaaaggtgtaatc
gcttcttggtctactgtacctatatttaaaggaatcgcattcgcctgcgccactatgatc
ttccattcaaacctctcctaccccattatattggtctgggtttcgaaatatttggtttca
agttttaattcgagattgccatgggctacctgtgataacgaatggaacagagatggctgt
gtgggcattgacattgttactggggtttccaacacatcagctttcaacactaccagcgca
atctcaattttaacgaacgtaacaaatcagacacagacaatgtcgtcggccgagcaattt
tggaattatgaagtattggaaatttcttcaggattagaagaacttggctccttacgttta
gacctcgtgctttatttgggtttaatctggatcttaggctaccttgcaatctttaaagga
ataaagtggtcagcaaaggtggtctacttcactgcaacggtaccaattgtcttgatactt
gtcgtggtcgtgagaggcgcaacgttagaaggtgcctcattgggaatctatcactatctg
acaccaaatgtaacactgttgaaagacaccgaagtgtgggtaggcgcggctacacaagtt
ctctattctttctgtgtggccaccggcagtcttacaacgcttggaagctacaacaaatac
aaccaaaattttttgaaagatattctgatgattgtgttgtcaaactgtctagcgagtttt
ctctgcggctttgccgttttttcaactttgggctccatggcgcatgctcagaatcaaact
atggacgaagttgcgcaatctggccccggattaatctttatagtttatccacaagcgtta
actttcttgcctttgccacagttttggaacgccatatttttcttaacaatttttcttatg
ggcttcgattctcagttgatatacgtcgaagccttctgtgcattattccttgactatttt
cggccattgagaacattccacaaatattcaaggccaatctttctggctttcggctgcttg
ggcttttatcttagcggtttgatatttgtaacaaagggaggcgtttacgtttttgaaatt
ttcaacacctacggtatggcaggatggagtttgttcttcatagctgcctgtgagtgtata
gcaattggttgggtgtatggtgctcatcgtcactgggatgaaatcaaccgaatgatagga
cctagcaagatccgacctgtgattattttcatatggaaatacgtagggccgattttatgc
gtgttggtgtccatttactacgttgctgtccacagtcgaatgacttacggtaactatatc
tacccaccttgggctcaagtcctttgtcattttgtatcagcaagttcagctttgtggata
ccactctatgctgtttatatcactatagtgtcaggcaagtcttggagagagcttcgcaga
caagaaaattcgaaaaaaccgatgattggagaggagatgccgggcaaatgctttgacaat
gacgaagaagtagaaatgctttag
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