Caldisphaera lagunensis: Calag_0348
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Entry
Calag_0348 CDS
T02380
Name
(GenBank) PKD domain protein,extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
clg
Caldisphaera lagunensis
Pathway
clg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Calag_0348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clg02000
]
Calag_0348
Transporters [BR:
clg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Calag_0348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
PKD
PKD_4
Motif
Other DBs
NCBI-ProteinID:
AFZ70125
UniProt:
L0AAT3
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All DBs
Position
complement(367863..370586)
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AA seq
907 aa
AA seq
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MSRKDRSLSKGALYGIIIVIIVVIIVGGVAAYYATKKPITTTTTTSTTTTTTTSITSTTP
TTFSTLSPVATSTYASVAGTPINFVLSSFTPSSNRYALFYAGNGKIINTTSQYVNITYNY
PGHYLVYYNVYQSGSLIGSSLSNLIEITVAPNVPSSLSDLVTVPTITFNITRNPTAPIFS
TGETVYLSGGFLQPPSGQNMTIYEYVWNFGNGQTMTVMANQTTLLPEENPVNVTYSSPGL
YAVSLTVITKNVSSGKTYNYTTYQTIAVSSSTSPFAIYSSNLQVPNPGSIIVSENVPGGP
YSFDPDIDYESVGFEVISNIFATLLVYNGSSTTSFIPVAAEYIPTQQNGGINSNYTEYTF
KIRPGLYFSNGDPLTAYDVWYSLIRDMLFSGGSPGTPGWILTQYLIPNYTPFTFVITAPN
DTQGFEEIMNAITYNNQTNTVTFHLYKPTAPQFLFTALADPLGAGILDAKWLEQIGAGIN
FTPAGFYSYQQQANEGNYNTQVQWNPISSGPYMIKSYTPGESVVLSPNPYWPTNISYIPK
PNDTVIIYWVKDPNTAYEMFASGQADIVTGLPSNYIPLVEQLESKGQASLYEFPTLSEFF
FTFVDNISQSALHSLNPSYHIPSYYFANPLVREAFAYAFNYTQYLNDIVGNVKYHFDFAS
PYCGVIIPGLPYYIPPTELTGCPTFNLTYAKQLMEESGYYNISVYFPIIVSSGDTVDFTA
ASMWAQALHDMDPNINAVPLYVPFSTIISYEVPGENPMPIYYLGWIADYPLASDFVNAMY
ETGGTYPGPNGWNVSYFANLSKYYASQGNTFLAQLYANESNEYAELNNLIIMADNAALVG
NTTEAAQLYKQAEQIAINLYFYVYTQMPNAYWVIKPYMHGFNNQISYEENPMIGGAADSL
YYWWVKG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaggaaagatagatccttgtctaaaggcgcgttatatggaataataatcgtaatt
atcgtggtaataatcgttggaggagtagcagcatattatgcaactaaaaagcctataact
acaaccacaactacctcaacaactacaacaacaactacatccataacctcaacaactcca
acaacattttcaacattaagtccagttgcaacatcaacatatgcatcagtagcaggaaca
ccaattaactttgtattatcatcatttaccccatcaagcaatagatatgcattattctat
gcaggtaatgggaaaataataaacacaacatcacaatacgttaatataacctataattat
ccaggtcattatttagtttattataatgtatatcaaagcggttcattaataggatcttca
ttaagtaatttaatagaaataacagtagcaccaaatgtaccatcaagcctatcagattta
gttacagttccaacaattacatttaacataacaagaaatccaacagcaccaattttctca
acaggtgaaacagtttatttatcaggaggatttttgcaaccaccatctggtcaaaacatg
acaatatatgaatatgtatggaactttggtaatggtcaaacaatgactgttatggcaaac
caaacaacattattacctgaagaaaacccagttaatgtaacttattcttcaccaggatta
tatgctgtatcattaacagtaataactaaaaacgtttcatctgggaaaacatataactat
acaacatatcaaactattgcagtatcatcatctacttcaccatttgcaatatattcatca
aacttgcaagtacctaacccaggttctataattgtttcagaaaatgttccaggaggtcca
tacagctttgatccagatatagactatgaatctgtaggttttgaggttatatcaaatata
tttgcaacgttacttgtatacaatggttcttcaactacttcattcattccagtcgcagct
gaatacataccaacacaacagaatggtggcataaactccaactatactgaatatacattt
aaaataagacctggtttgtatttctctaatggagatccattaacagcatatgatgtatgg
tattcattgataagagatatgttattctcaggaggatcaccaggtacaccaggttggata
ttaacacagtaccttataccaaattatacaccatttacttttgttataactgcaccaaat
gatacacaaggatttgaagaaataatgaatgcaataacttataataatcaaacaaataca
gtaactttccatctatataaaccaacagctccacaattcttatttactgcattagctgat
ccattaggtgctggtatattggatgctaaatggttagaacaaataggggcaggaattaat
ttcacgccagctggattttattcatatcaacaacaagcaaatgaaggtaattataataca
caagtacaatggaacccaatatcatctggaccatacatgatcaaatcttatacccctgga
gaaagcgttgttttatcaccaaatccatattggcctacaaatatttcatacataccaaaa
ccaaatgatactgttataatatattgggttaaagatccaaacactgcatatgaaatgttt
gcatctggacaagctgatatagtaactggtttaccatctaactatatacccttagttgag
caattagaaagcaaaggacaggcatcattatatgaattcccaacgttatcagaatttttc
ttcacgtttgtcgataacatatcacaatcagcattacatagcctaaacccatcttatcat
attccatcatattacttcgcaaacccattggttagagaggcatttgcatatgcatttaac
tatacacaatacctaaatgatatagtaggtaatgttaaatatcactttgactttgcaagt
ccctattgtggagttataatacctggtttaccatattacattccaccaacagagctaaca
ggttgcccaacatttaacttaacatatgcaaaacaattaatggaagaatctggatattat
aacatatcagtatacttcccaataattgtatcaagtggtgatacagttgatttcacggca
gcatcaatgtgggcacaagcattgcatgatatggatccaaacataaatgctgttccctta
tatgtaccattctcaactataatatcatatgaggttccaggagaaaatccaatgccaata
tactatctaggttggatagctgattatccattagcaagcgactttgttaatgctatgtac
gaaacaggaggtacctatcctggaccaaatggatggaatgtatcatattttgctaatcta
agcaaatattatgcttcacaaggaaatacattcttagcacaattatatgctaatgagtct
aatgaatatgctgaattaaataatttaataataatggctgataatgcagctttagtaggt
aacacaacagaagcagcacaactttataaacaagctgaacaaatagcaattaatttgtat
ttctatgtatacacgcaaatgccaaatgcatattgggtaattaaaccatatatgcacgga
tttaataatcagataagctatgaagagaacccaatgataggaggagcagcagattctcta
tattactggtgggttaaaggataa
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