Caldisphaera lagunensis: Calag_0430
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Entry
Calag_0430 CDS
T02380
Name
(GenBank) putative exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain
KO
K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Organism
clg
Caldisphaera lagunensis
Pathway
clg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Calag_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clg03009
]
Calag_0430
Ribosome biogenesis [BR:
clg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Calag_0430
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Brix
Motif
Other DBs
NCBI-ProteinID:
AFZ70198
UniProt:
L0A8K4
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All DBs
Position
complement(434404..435012)
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AA seq
202 aa
AA seq
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MPSVPLRFEKIYNKNKSSILLTSSRDPSTRTRTFINELSSVLPKSIKIGRGKLSLEELNQ
IILRYNIPKLIVINEYKGNPGKIQLFKPNENSKRPDLILYAIIYGVSLRKELGFNKKISV
RDAAIKLIDEKQDNVKYDYINKLSTMLDLNVNDRLIDENNIAYFLVKFDFPYIDIKVFNR
NVNIGPNFKLKFGDDINDGSKF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgcctagtgttcctttaagatttgaaaagatatataataaaaataagtcttcgatttta
ttaacgagcagtagagatccaagtacaagaactaggacatttataaatgagctatccagc
gttttacctaaaagcattaagattgggagaggtaaactatcattagaagaactaaatcag
atcattttaaggtataatattccaaaattgattgtaattaatgaatataaaggtaatccg
ggtaaaattcagttatttaaaccaaatgaaaatagtaaaagacctgatttgattttatat
gcaataatttatggggtttctttgagaaaagaactaggatttaataaaaaaataagcgta
agagatgctgcaataaagttaattgatgaaaaacaagataatgtaaaatatgattatata
aataaactatcaaccatgctagatctaaatgtaaatgatagattaattgatgaaaataat
attgcttattttttagtaaaatttgattttccttatattgatatcaaagtttttaataga
aatgtgaatataggccctaattttaaattaaagtttggtgatgatataaatgatggaagt
aaattttaa
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