Caldisphaera lagunensis: Calag_0435
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Entry
Calag_0435 CDS
T02380
Name
(GenBank) rRNA metabolism protein, SBDS family
KO
K14574
ribosome maturation protein SDO1
Organism
clg
Caldisphaera lagunensis
Pathway
clg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Calag_0435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clg03009
]
Calag_0435
Ribosome biogenesis [BR:
clg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Calag_0435
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
T2SSE_N
DUF6576
Motif
Other DBs
NCBI-ProteinID:
AFZ70203
UniProt:
L0A8K8
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All DBs
Position
complement(437568..438266)
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AA seq
232 aa
AA seq
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MTKKQEFIIAWIELKGQKFEIPVKPDLAFKFREGEKVSISEVLWADTIFKDVKKGLKASP
DSLRKAFGTEDIEKIAEKILKEGQIQLTEEERKKMIEAKRKQIINYIVKNTIDPKSGKPI
PEQRIENALDQVRFNIDPFKGAEAQALEAVKKLSILMPIKVAKALLEITIPSEYASRAYK
EIQRIGEVKKANWGSDGSLKVELEIPAGAQIEVIDKVQSLAKGQANISVKVV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaaaacaagaatttattatagcatggattgaactaaaaggacaaaaatttgag
ataccagtaaagcctgatcttgcttttaaatttagagaaggtgaaaaagttagcatatca
gaagttttgtgggctgataccatatttaaagatgtaaaaaaaggactaaaggcaagtcca
gattctttgaggaaggcatttggcacagaagatatagaaaagattgctgagaagatatta
aaagaggggcaaatacaacttacagaagaagaaaggaaaaagatgatagaggccaagcga
aagcaaattataaattatatagttaagaatacaatcgaccctaaatctggaaaaccaatt
cctgaacaaagaattgaaaatgcattagaccaggtaaggttcaacatagatccatttaaa
ggtgcagaagctcaagcattagaagccgtaaaaaaattatcaatattaatgccaattaaa
gtagcaaaggctttacttgaaataactattccatcagaatatgcctctagggcatataaa
gaaattcaaaggattggtgaagttaagaaagccaattggggatctgatggtagcttaaaa
gtagagcttgaaatacctgcgggagcacagatagaggtgatagataaggttcagtccctt
gcaaaagggcaagcaaacatatcagtaaaggtggtgtaa
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