Caldisphaera lagunensis: Calag_0605
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Entry
Calag_0605 CDS
T02380
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
clg
Caldisphaera lagunensis
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clg03400
]
Calag_0605
DNA repair and recombination proteins [BR:
clg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calag_0605
Archaeal homologous recombinant proteins
Calag_0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_13
SMC_N
AAA_21
SbcC_Walker_B
AAA_29
ABC_tran_CTD
Rad50_zn_hook
DUF3287
AAA_27
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFZ70362
UniProt:
L0AB40
LinkDB
All DBs
Position
583348..586104
Genome browser
AA seq
918 aa
AA seq
DB search
MGYYILDSLEIENFLSHKNTKINFSSGSLAFVGENGAGKSSILEALYFALTLKPWRDRAY
LINANSKKAVVKIRLKELEGNDMLELRVDLAKKGNDSFTTEVILKRNNKVEATRQEDYKR
LVKQYLNMQSVPDITDFLQSSIIVKQNTLNEIASKMTDNKKDFKELIERALGIESYKDAE
EGLKKVDIRSENQSIGLIYNIKQRHLDEVNKNIVSKKQEYDMIINKINEIKIEIQKKDRE
KQELENLINSLKKQLDEEQDKVLELNSLRTRKEELLKYLNKRQKEIEELQKEIEELQKEI
ENIESQKSVADLYDKLNEYDSLSMEFKDLESKIKELEFIKNNYEQMIKYQEYEEKYNGLN
RERDEINDKLKKVEISLNYYNNLYKEYKNRINKIKNLKNNFREFANIDVEKDLDQFINQI
NEEIKQINNEKEELDKKINNIKEEIIKRETEIKRMKEYLNVLNNEDEKSVECPVCHTKLS
GKTIEDLRNNYLNEINIHTNELDKLKKERELLDKSQREIDDKQNKIKNLMQEITIFKEQI
TEEMKESGKKANELSLNKKELEQKLNEISDNLDDIKAFHEQYLAAKVNLEKSKIDLSKIN
EKINEYEEMKKRYSDLDNSLKNLLKLILDTTKVNNVRKAREIINNARAKYMGLENIKNSL
MKNNEELISMKNDLNDNMVEYKNIEEKINQFKNIEEKINELKNEIDGKMISYQNILKDIS
RLEGEKKNNEDNANKLENEIKALEEIKNKIIVGLASINVFNKVQRSLYNNALIALENEMN
NVFSKFGLDYSRIEIRENQDGNIGVYVIDRNGNERPISVLSGGEQSVIALAFVIALNKII
QAKIGFLALDEPTESLDEQRRKILIEILSKLTESNDNLPPPIYQLLVITHHNDIMESIDQ
VCNVAKEDGISKVICEGD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgggttattacattttggattcattagaaattgaaaactttttaagccataaaaatacc
aaaattaatttttcatcaggcagtttagcatttgttggcgaaaatggtgctggaaaaagt
agtattttagaggcattatattttgcgttaactttaaagccttggagggatagggcatat
ttaataaatgcaaattcaaaaaaggctgtagtaaagattagattaaaagagcttgaagga
aatgatatgctggaattaagagtagatcttgcaaaaaaaggaaatgatagctttacaacg
gaagttattttaaagagaaataataaagttgaagcaacaagacaagaagattataagaga
ttagtaaaacaataccttaacatgcaatcagttccagatattactgattttttgcaaagt
tcaataatagttaagcaaaatacattaaatgaaatagcaagcaaaatgacagataacaaa
aaagatttcaaagaattaatagaaagagctttaggtatagaatcttataaagatgccgaa
gagggcctaaagaaagttgatattagatctgaaaaccaaagtattggtttaatttataac
attaaacaaaggcatcttgacgaagtgaataaaaatattgtaagcaaaaaacaggaatat
gatatgattataaataaaataaatgagataaaaattgagatacaaaagaaagatagggaa
aaacaagaattagaaaatttaataaatagccttaaaaagcagttggatgaagaacaagat
aaagttttagaattgaattctttgagaacaagaaaagaagagcttttgaagtatttgaat
aaaaggcaaaaagaaatagaagaattgcaaaaagaaatagaagaattgcaaaaagaaata
gaaaatattgaaagtcaaaaaagtgtagcagatttatatgataagctaaatgaatatgat
agtctatcaatggaatttaaagatctggaaagcaaaataaaggaattggaatttataaaa
aataactatgaacaaatgataaaatatcaagaatatgaagaaaaatacaacggattgaat
agggaaagggatgaaataaatgataaattaaaaaaagtcgagattagtttaaattactat
aataatttatacaaggaatataaaaacagaataaataaaattaaaaatttgaaaaataat
tttagggaatttgcaaatattgatgttgaaaaagatttagatcaatttataaatcaaatt
aatgaagaaattaaacaaataaataatgagaaagaagaattagataaaaagattaataat
ataaaagaagagattataaaaagggaaactgaaattaaaagaatgaaggagtatttaaat
gtattaaacaatgaagatgaaaaaagtgttgaatgcccagtttgtcataccaagttatct
ggaaaaacaattgaagatcttagaaataactatcttaatgaaataaatattcatacaaac
gagcttgacaaattaaaaaaagaaagagaattattagataaaagtcaaagagaaattgat
gataaacaaaataaaataaagaatcttatgcaagagattacaatttttaaagaacaaata
accgaagaaatgaaagagtctggtaaaaaagcaaatgaactaagcttgaataagaaagaa
ctagaacaaaagttaaatgagatatctgataatcttgatgatattaaagcctttcatgaa
caatatttagctgcaaaggttaaccttgaaaagagtaaaattgatttaagtaaaattaat
gagaagataaatgaatatgaagaaatgaaaaaaaggtattcagatttagataatagtttg
aaaaatttacttaaactcattttagatacaactaaagttaataatgtaagaaaggcaaga
gaaataataaataatgcaagagcaaaatatatgggattagaaaatattaaaaatagtcta
atgaaaaataatgaggaattaatatctatgaaaaatgatttaaatgataacatggttgaa
tataaaaatattgaagaaaaaataaatcaatttaaaaatattgaagaaaaaataaatgaa
ttaaagaatgaaatagatggcaagatgatttcatatcaaaatattctgaaggatattagt
agacttgaaggtgaaaagaaaaataatgaggataatgcaaacaaattagaaaatgaaatt
aaggcgttagaagagataaagaataaaataattgttggattggcatctattaacgtattt
aataaggttcaaagatctctttataataatgccttaatagcgcttgaaaatgaaatgaat
aatgtattttcaaagtttggactagattattctaggattgagatcagggaaaaccaagat
ggaaatataggtgtatatgtaatagataggaatggtaatgaaaggccaatatccgtatta
agcggaggagaacaaagtgttatagcattggcatttgttatagcgttaaataagataatt
caagccaaaataggttttttagccttagatgaaccaacagagagtttagatgagcagaga
agaaagatattgatagaaatcttaagtaaattaacagaaagcaatgataacttacctcca
ccaatttatcaattattagtaataacacatcataatgatataatggaaagcattgatcaa
gtatgcaatgtagcaaaagaagatggtatctctaaagttatatgtgaaggtgattag
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