Caldisphaera lagunensis: Calag_0645
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Entry
Calag_0645 CDS
T02380
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
clg
Caldisphaera lagunensis
Pathway
clg02010
ABC transporters
clg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calag_0645
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Calag_0645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clg02000
]
Calag_0645
Transporters [BR:
clg02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Calag_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
CNNM
ANF_receptor
At5g19230
HEPN_RnaseLS
PBCV_basic_adap
Motif
Other DBs
NCBI-ProteinID:
AFZ70397
UniProt:
L0AB78
LinkDB
All DBs
Position
complement(628295..629608)
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AA seq
437 aa
AA seq
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MYIILNKTLNRSVSGTTIAIIIVVIVIIIVGAVVGGYYATRKPTTTSTVSAPPYILIGTL
YASTGSFATSSMSQYEGLQTWAKWVNESGGIYVKEYGKKIPVKIVAYDDLSSTSTAQSDY
QQLLNVNHVNILVADFGSVLTAPAVSLTNASHILLWDVTGSSYAFFVNNPYIIDTSIPVS
GAWVSVIAEFLHSLNISKVAVLYASNDFNAYQDYLLGTYFKQYGITPILNESYPTSTSDF
SSYIATLESLKPQAVIEFGYPTDDIPFLNQLASSKASFPLIYTNYPGLQLPNLVSGVGGN
MNGTFTGAFPPIVEYKVNYGPNLTQFASLFESTYPGVPINYNVLAGFNAGLIIQAAIQDA
GTFTNQTALKQAVLNDISGKIVTLTGPFEITQNGEQLGETPAIAQIWIYPNMTTKLTIVW
PSNLANGTAVYPEPPLP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgtatataatattgaataaaaccctgaatagatcggtctcgggcacaactattgcaata
ataatcgtagttatcgtaataataatcgtaggggcagttgttggaggatattatgcaact
agaaaaccaactactacatctactgtttcagcaccaccatatattttaattggtacattg
tatgcatcaactggtagctttgctacttcatctatgtcacaatatgaaggtttacaaaca
tgggctaagtgggttaatgaaagcggaggtatttatgtaaaagaatatggtaaaaagatt
cctgttaaaattgtagcatatgatgatttaagttcaacatcaaccgcgcaaagtgattac
caacaattgttaaatgttaaccatgttaacatattggttgctgattttggttcagtatta
acagctccagcagtatcattaactaatgcaagccatattttattatgggacgttacagga
agttcttatgcattttttgttaataatccctacattatagatacctcaataccagtttct
ggtgcatgggtttctgtaatagcagaatttttgcacagcctgaatatatcaaaagtagct
gtattatatgcttcaaatgattttaacgcatatcaagattatttattaggtacatatttt
aagcaatatggaataacacctatattaaatgaaagctatccaacgtctacatcagatttc
tcatcctatattgctaccctagaatcccttaagccacaggcagttatagaattcggttat
ccaacagatgatataccatttttgaaccagctagcatcatcaaaagcaagctttccatta
atatatacaaactatccaggacttcagctaccaaatttggtttctggggttggaggtaat
atgaatggaacatttacaggtgcttttccgccaatagttgaatataaggttaattatgga
cctaatctaacgcaatttgcgagtctctttgaatcaacttaccccggggttccaataaat
tataacgtattagctggattcaatgcaggattaattatacaagctgcaatacaagatgct
ggcacttttactaatcagactgcattaaaacaggcagtcctaaatgatataagtggtaag
atagtaacgttaacgggtccctttgaaataacccaaaatggggaacaattgggtgaaaca
cctgctatagcccagatttggatatatccaaatatgacaacaaaactaactatagtctgg
ccatcaaatttagcaaatggaactgctgtttatccagaaccacctttaccttaa
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