Caldisphaera lagunensis: Calag_1008
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Entry
Calag_1008 CDS
T02380
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
clg
Caldisphaera lagunensis
Pathway
clg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Calag_1008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clg03400
]
Calag_1008
Enzymes [BR:
clg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Calag_1008
DNA repair and recombination proteins [BR:
clg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Calag_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFZ70730
UniProt:
L0ACF6
LinkDB
All DBs
Position
1023040..1023699
Genome browser
AA seq
219 aa
AA seq
DB search
MEDIEEINQKIISCRKCPRLINYINDVAKHPPKRFKDWNYWAKPVPSFGDKNAEIAIVGL
APAANGGNRTGRVFTGDHSGDWLFKALYETGFANKPTSISKDDGLEIKNIYITAVIHCAP
PQNKPNKDEISNCLPYLLSELKLLKNLKVIITLGKIAFDTITNIYNVKYEFKHLAVYDLP
GNKKLIASYHPSARNTNTGLMGWEQWVNVFKKAKELIGE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagaaataaaccaaaaaataatttcatgtagaaaatgccctaggtta
attaattacataaatgatgttgcaaaacatccgccaaagagatttaaagattggaattat
tgggccaaacctgtgccaagctttggagacaaaaatgcagaaatagcgatagttggatta
gcaccagcagcaaatggaggaaatagaacaggtagagtatttactggtgatcattcaggt
gattggctatttaaagctctgtatgaaacaggatttgcaaataagccaacaagcataagt
aaagatgatggattagaaataaaaaatatttatattacagcagtaattcattgtgcacct
cctcaaaacaagccaaataaagatgagatatctaattgcttgccttatttgttaagtgaa
ttaaaattattaaaaaatttaaaagtaataataaccttaggaaaaatagcgtttgataca
ataacgaacatatataatgtaaaatatgaatttaagcatttagcagtttatgatttgcca
ggaaataaaaaattaatagcaagctatcatcctagcgcgaggaatacaaacacagggctt
atgggatgggaacaatgggtaaatgtatttaaaaaggcaaaagagttgataggtgaataa
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