Caldisphaera lagunensis: Calag_1193
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Entry
Calag_1193 CDS
T02380
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clg
Caldisphaera lagunensis
Pathway
clg00260
Glycine, serine and threonine metabolism
clg00460
Cyanoamino acid metabolism
clg00630
Glyoxylate and dicarboxylate metabolism
clg00670
One carbon pool by folate
clg00680
Methane metabolism
clg01100
Metabolic pathways
clg01110
Biosynthesis of secondary metabolites
clg01120
Microbial metabolism in diverse environments
clg01200
Carbon metabolism
clg01230
Biosynthesis of amino acids
clg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Calag_1193
09102 Energy metabolism
00680 Methane metabolism
Calag_1193
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Calag_1193
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Calag_1193
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Calag_1193
Enzymes [BR:
clg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Calag_1193
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AFZ70913
UniProt:
L0AAH1
LinkDB
All DBs
Position
complement(1190482..1191777)
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AA seq
431 aa
AA seq
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MNKEYIDKILEYTNLQNVWRVKETINLIASENVMSPLALTVYMSDFMNRYAEGKPFKRYY
QGTKYSDELEVMSNELMGKLLHTDMVDIRPISGTIANASVFRILAEPGEQAVIAPVQAGA
HVSHTKFGTLGALGIKQIELPYDEERMNVDIDKAIKVIEQVKPKFAVLGGSVYLFPHPVK
EISNAIHSVNGKLVYDSAHVLGLIVGNAWRNPLDHGADVMTSSTHKTFPGPQGGVIAFKD
KDLYKEVGKTIFPWFLSNHHLHRLPATAITALEMIEFGEAYAKQITRNAKKLAESLAERG
FKVIGEHLGYTMSHQVLVDVSPQGGGAKIAKMLEDGNIILNKNLLPHDPPEAVQNPSGLR
IGVQEMTRFGMKEDEMDQIAEFIEKIAIKKEDISKVREEVKEFRKNYQKVHYGYSSDLIN
GKYVNLLNLLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggaatatattgataaaattttggaatatactaatttacaaaatgtatggaga
gttaaagaaacaattaatttgatagccagcgaaaatgttatgagtcctttagccctaact
gtttatatgagcgattttatgaatagatatgctgaaggaaaaccatttaaaagatattat
caaggaacaaaatattcagatgaattagaagtcatgtctaatgaattgatgggaaagctt
ttgcatacagatatggttgatataaggccaattagtggaactatagcaaatgcctcagtt
tttagaattttagcagaacctggagagcaagcagttattgcacctgttcaagcaggagct
catgttagtcacactaagtttggcactctaggagcattgggtataaaacaaatagaattg
ccatacgatgaagaaagaatgaatgttgacatagataaagcaatcaaagttattgaacaa
gttaaacctaaatttgccgtattaggaggaagtgtttatttattccctcatccagtaaag
gagatttcaaatgcaatacattcagttaatggaaagcttgtctacgattctgcacatgtt
ttaggtttgattgttggaaatgcatggagaaatccgttagaccatggggctgatgttatg
acctcttctacacacaagacatttccagggcctcaagggggggtaatagcttttaaggat
aaagatttatataaagaagtgggaaaaactatattcccatggtttttaagcaatcatcat
ttacatagattacccgcaacggctataacagctcttgaaatgattgaattcggagaggca
tatgcaaaacaaataacaagaaatgccaaaaagctagcagagtctttggcagaaagaggg
tttaaagtaataggagaacatttaggttatacaatgagtcatcaagtgcttgtagacgtt
tctcctcaaggcgggggagcaaaaattgctaaaatgttagaagatggcaatattatatta
aataagaacttgttacctcatgatcctccagaagcagtacagaatccaagtggattaaga
ataggagtccaagaaatgacaagatttggtatgaaggaagatgaaatggatcaaatagca
gaatttatagaaaagattgctatcaaaaaagaagatataagcaaggtaagggaggaagta
aaagagtttaggaagaattatcaaaaggtacattatgggtacagttctgatctaataaat
gggaaatatgttaatttgttaaatcttttaatataa
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