Caldisphaera lagunensis: Calag_1217
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Entry
Calag_1217 CDS
T02380
Name
(GenBank) DNA topoisomerase I, archaeal
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
clg
Caldisphaera lagunensis
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clg03032
]
Calag_1217
03400 DNA repair and recombination proteins [BR:
clg03400
]
Calag_1217
Enzymes [BR:
clg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Calag_1217
DNA replication proteins [BR:
clg03032
]
Prokaryotic type
DNA Topoisomerases
Calag_1217
DNA repair and recombination proteins [BR:
clg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Calag_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
AFZ70936
UniProt:
L0AAM6
LinkDB
All DBs
Position
1212377..1214446
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AA seq
689 aa
AA seq
DB search
MSKNTSRNCYSYKDFIALIAEKPKAAEKIALALGSYGKLEKCRYYKVPYYVIRSDGRTIL
ILPSAGHLFGPSTTGRGVPIVKIVWKPLWEFDKAAYYTKTYYMMMSSILPNAGSYINACD
FDIEGSVIGYKIIESFGDVKKAKRMKYSTLTKNDIIDAFNKLSPLDLENVNAGYARHELD
WLWGINVSRLLMKSFKNETNKSISLSAGRVQSPTLAEAIRRWIEINLYLPKPFLSILILG
EYDGKRFLITPKNWSPKTISEAKEIKKFLEKNPVLNVDDYQESKEKVPPPPAFNLGDLQK
ESSRIYGFSPFKTQSIAEELYLETLISYPRTNSQKLPKTINYKQIINDLSKQSYKNLIDT
LLKETQGKLNPVQGREDDPAHPAIYPTGEVPKKIYGDYLKIYDLIVRRFLSAFSKEAILG
KSYVTLSDNENRKYKAEGLVVMEEGWLKYYTFSYPKINEIPVLRKNDKVKIIKVDLKTIW
PKINVSLSRTSLLRWMERVNIGTEATRARIIELLYKRKYLINKGRNTEITNLGYAVYKAI
ELVSKELISPELTRNFEEKLDLISKGKYTKDEIVNEAKEFLTKIIKEKLNDKSIGKSLAI
ALGIEKPEEMCYICKREAKHKVLNYSLCDFHFMALSKIKENIADLVNILEDNDVNILKEL
SENKSIGLWIRETSKFLINNDIKIQNLKV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaatactagcagaaattgttattcctataaagattttatagcattaatagca
gaaaagccaaaagcagctgaaaagatagcattagcgctaggaagctatggaaaattagag
aagtgtagatattataaagttccatattatgtaattagaagtgatggtaggactatttta
attctaccaagtgctggccatttatttggcccctcaacaacaggaagaggagttcctata
gtaaaaatagtatggaaaccattatgggaatttgacaaagctgcatattatactaaaaca
tactatatgatgatgtcatctattttaccaaatgctggttcctatataaatgcttgcgac
tttgatattgaaggaagtgttataggctataaaataatagaaagctttggagatgtgaaa
aaagcaaagagaatgaaatactcaaccttaacaaaaaatgacattattgatgcatttaat
aaattatcaccattggatttagagaatgttaacgctggttatgcaaggcatgagttagat
tggttatggggtataaatgtatcaagacttcttatgaaatcatttaaaaatgaaacaaac
aaaagtatctcattaagcgcaggaagagttcaaagccctactcttgctgaggcaataaga
agatggatagaaataaacctctatttaccaaaaccttttttatcaatattaatattaggg
gaatatgatggcaaaaggtttctaataacacctaaaaattggtctccaaaaacaatttct
gaagcaaaagaaataaagaaattcctagaaaagaacccagttttaaatgttgacgactac
caagaaagtaaagagaaagttcctcctcccccagcatttaatttaggagatctccaaaaa
gagtcctcaagaatttatggattttccccatttaaaacccaaagtattgcagaagagctt
tatttagaaacattaattagttatcctagaacaaatagccaaaaactgcctaaaacaata
aattataagcaaataatcaatgacctatctaaacaaagctataaaaatttaattgatacg
ttattaaaagaaacacaaggcaaactaaatcctgttcagggaagagaagatgatccagca
catcctgcaatatatccaacaggtgaagttcctaaaaaaatatacggagattatttaaaa
atatatgatcttatagtcagaaggtttttgtcagcattttcaaaagaagctattctagga
aaaagctatgttacgttaagcgataatgagaatagaaagtataaggctgaaggtttagtt
gtaatggaagaaggatggttaaaatattacacattttcatatccaaaaatcaacgaaata
ccagttttaaggaaaaatgataaggtaaaaataataaaagttgatttgaaaaccatatgg
cccaaaataaatgtatcccttagtagaacttcattattaagatggatggaaagagttaat
attggaacagaagcaactagagctagaattattgaactattatataaaagaaagtattta
ataaacaaaggaagaaatacagaaataactaatttaggatatgcagtttataaggccatt
gagcttgtctctaaggagttaatttctcctgaattaacaagaaattttgaagaaaagctg
gatctaatatcaaaaggaaaatatacaaaggatgagatagtgaatgaagcaaaggaattt
ctaactaaaataataaaagaaaaattaaatgataaaagcattggaaaaagtttagcaatt
gctttaggtatagaaaagccggaagaaatgtgttatatctgtaaaagggaggccaaacac
aaagttttaaactacagtttatgtgattttcattttatggcattaagtaaaataaaagag
aatatagcggatttggttaacatattagaagataatgatgtaaatatattaaaagaactt
tcagaaaataaatctataggcttatggattagagagacaagtaagtttttaattaataat
gatattaaaatacaaaatttaaaagtttaa
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