Caldisphaera lagunensis: Calag_1386
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Entry
Calag_1386 CDS
T02380
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
clg
Caldisphaera lagunensis
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clg03016
]
Calag_1386
Enzymes [BR:
clg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Calag_1386
Transfer RNA biogenesis [BR:
clg03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Calag_1386
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
SEN2-like_N
Motif
Other DBs
NCBI-ProteinID:
AFZ71095
UniProt:
L0ADI6
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All DBs
Position
1365372..1365899
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AA seq
175 aa
AA seq
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MIKMKNAKDTYLELNIEEEKLMVKNCYDNEFCEQLIKNDLIVNNSVNLLEGIYLIAIEKA
MIDNEVGWGKALELIDRYKIPLHIFLVYYDLRKRGRRVWIGPRDNTLISETHKLKKIEVF
VLSEGSPITTNKIANWSELAVADSHIPIIAIVDKNGEITYYESRIYMLNSLSNDK
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgataaagatgaagaacgctaaggatacatatcttgaattaaatattgaagaagagaaa
ctaatggtaaaaaattgctatgataatgaattttgtgagcaactcataaaaaatgattta
atagttaataatagcgtgaacctacttgaaggaatttatttaatagcaatagaaaaagct
atgattgataatgaagttgggtgggggaaagcattggaattgattgatcgctataaaata
ccattacatatatttttggtttattatgatttgagaaaaagaggaagaagagtttggatt
ggaccaagagataatactcttatttcagaaacacataagctaaagaaaatagaggttttt
gtgttaagcgaaggaagtcctataacaactaataaaattgccaattggagcgagcttgct
gttgcagattctcatattcctattatagcgatagttgataaaaacggtgaaattacatat
tacgaatcaaggatatacatgcttaactcattatctaatgacaaataa
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