KEGG   Caldisphaera lagunensis: Calag_1474
Entry
Calag_1474        CDS       T02380                                 
Name
(GenBank) ribosomal protein L40E
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
clg  Caldisphaera lagunensis
Pathway
clg03010  Ribosome
Brite
KEGG Orthology (KO) [BR:clg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Calag_1474
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Calag_1474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:clg03011]
    Calag_1474
   04121 Ubiquitin system [BR:clg04121]
    Calag_1474
Ribosome [BR:clg03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    Calag_1474
  Archaea
    Calag_1474
Ubiquitin system [BR:clg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Calag_1474
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 DZR Zn_ribbon_RanBP DnaJ_CXXCXGXG Zn_ribbon_IFT122 DUF7577
Other DBs
NCBI-ProteinID: AFZ71176
UniProt: L0ABE3
LinkDB
Position
1444644..1444817
AA seq 57 aa
MPITDPELIKIVEKRVFEVSICRRCGAKNPLNAKKCRRCRGTDLRPKKKELAKFKAQ
NT seq 174 nt   +upstreamnt  +downstreamnt
atgccaataaccgatccagagctgataaagatagttgagaagagagtatttgaggttagt
atatgtagaagatgtggagcaaaaaatccacttaatgccaagaaatgcaggagatgtaga
ggaactgatttaaggcctaagaagaaagagctggccaagtttaaagcacaataa

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