Caldisphaera lagunensis: Calag_1500
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Entry
Calag_1500 CDS
T02380
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
clg
Caldisphaera lagunensis
Pathway
clg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Calag_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clg03021
]
Calag_1500
Enzymes [BR:
clg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Calag_1500
Transcription machinery [BR:
clg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Calag_1500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AFZ71201
UniProt:
L0ABG6
LinkDB
All DBs
Position
1467025..1469691
Genome browser
AA seq
888 aa
AA seq
DB search
MSYMSSNKESERYLIDKIHFSLLSPIEIRKMAKVTVVRPEIYEADGTPVSGGVRDSHFGA
IEPGERCPVCGNTREDCPGHFGKIDLARPVLLPHLGDKINVILQSTCRNCGRILLPDEKI
TYYTNIYLKLKEKWPVLAETFADEVAKQTSSVSECPHCGYKQYKLKFIKPFTFYEVRPEG
EIRLTPSEIRERLERVQDKDIVVLGVDPKAARPEWMVLTVLPVPPLSVRPSITMESGMRA
EDDLTHALVEIVRQNERLKNFLSSNAPESMVEEAWQTLQNVIAAYIDNELPNIYQLSHRG
RKQLKTIAQRLKGKEGRLRGNLNGKRVNFSARTVISPDPYISIDEVGVPEEIAKILTLPI
VVTPYNIEEARKYVLNGPYNWPGAMFVYKSRQNMKIDLRYQRNYRQLAESLEVGDIVERH
LLNGDIVLFNRQPSLHRMSIMAHKVRVMPGRTFRLNLLDCAPYNADFDGDEMNLHVPRLE
EARAEAEELMLVEKQILSPRYGGPIIGGRQDYISGSYLLTVKTNLLTKEQVSLLLAAANY
KGKMPEPAIIKPQPLWTGKQLVSLFLPKGLSFEGRAKINAGELKCDNERCFFDSYTIISN
GRLLMGVFDKNAIGAEQPENVLHYITLEYGPDKAREFLDNVFRMFIRMLEIKGFSISLKE
VEITKEAKDKIKIMVEQAKNEIQEIINNYKEGNLEVIPGRTAEESLELKIIQRLQKLRDD
AGKLAISYMDPFNNAFIMARTGARGSDINITQMAAMLGQQTVRGKRISRGFRTRTLPQFK
PGDLSPEARGFIISNFRLGLKPYEVFFHAAGGREGLVDTAVKTSQSGYMQRRLINALQDL
YVSYDGTVRDSVGNIVQFKYGEDGVDPMLTYHGKAVNIDRIIQKAKGE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatatgagtagtaataaagaaagtgaaagatatcttattgataaaatacacttt
agcttgttgagcccaatagaaataagaaagatggctaaggtaactgtagttaggccagaa
atttatgaggcagatggtacacctgtatcaggtggggtaagagattctcatttcggagca
atagaaccaggtgaaagatgtccagtatgtggaaatacaagagaggactgtccaggtcat
tttggaaaaattgatttagcaaggccggtcttgctacctcatttaggagataagataaat
gtaattttgcaatctacatgtagaaattgtggaagaattctattacccgatgaaaaaata
acatattatacaaacatttatttaaaactaaaagaaaagtggccagttttggcagaaaca
tttgcagatgaggtagcaaaacaaacttcttcagtttcagaatgtcctcattgcggttat
aaacaatataagttgaagttcattaagccttttactttctatgaagttaggcctgaagga
gaaattagattaacgcctagtgaaataagagaaagattggaaagggttcaagataaggac
attgttgtattaggggttgatccaaaggctgctagacctgaatggatggtattaacagtt
ttacctgttccgcctttatctgttagaccttctataacaatggaaagtggtatgagagca
gaagacgatttaactcatgcattagttgaaattgtaaggcagaatgaaaggcttaagaat
ttcttatcatcaaatgccccagaatctatggttgaagaagcatggcaaacattacaaaac
gttattgctgcatacatagataatgaattaccaaacatatatcagttatcccataggggt
agaaaacagctaaaaacaattgctcaaagattaaaaggtaaagaaggtagattaaggggt
aatcttaatggtaaaagagttaatttctcagcaagaactgttatatctcctgatccatac
ataagcatagatgaagtaggggttcctgaagaaatagcaaagatattaactttgcctatt
gttgtaactccttataatattgaagaagcaagaaaatatgttttaaacggtccgtataat
tggcctggagcaatgtttgtatataagagcaggcaaaatatgaaaattgatctaagatat
caacgcaattataggcagcttgcagaaagcctagaagtaggggatatagtagaaagacat
ttactaaatggagatatagtattatttaatagacaaccaagccttcatagaatgtccata
atggctcacaaggttagagtaatgcctggacgtacatttaggctcaatttgcttgactgc
gcaccttataatgcagactttgatggagacgaaatgaacttacatgtaccaagacttgaa
gaggcaagggctgaagcagaggaattaatgcttgttgaaaagcaaatactttcacctaga
tatggaggtcctataattggaggaagacaagactatattagcggttcatatctattaaca
gttaaaacaaatctcctaactaaagaacaagtatcattattgttagctgcagcaaactat
aaaggcaaaatgcctgaacctgctataataaagccacaacccttatggacaggaaagcag
ttagtaagtctattcctaccaaaaggtttaagttttgagggaagggcaaagattaatgca
ggagaattaaaatgtgataatgaaaggtgcttctttgattcatatactataattagtaat
ggaagattactcatgggagttttcgataaaaacgcaattggagctgagcaaccagaaaat
gtattgcattatataacattagaatatggtccagataaggccagggaattcttagataat
gtatttagaatgtttattagaatgctggaaataaaaggcttttcaatatctctaaaagaa
gttgaaataacaaaagaggcaaaagataaaattaaaatcatggtagaacaagctaaaaat
gaaattcaagagattattaataattacaaggaaggcaacttggaagttatacctggaaga
accgctgaggaaagcttagaattaaagataattcaaagattgcaaaagctaagagatgat
gcaggtaagttagcaattagctacatggatccatttaacaatgcatttattatggcaaga
actggggctagaggtagtgatattaatattacacaaatggcagctatgttagggcagcaa
acagtaagaggtaaaagaatttcaagaggttttaggactagaacgttacctcaatttaag
ccaggagatttatcgcccgaggcaagaggatttattataagcaactttagactaggatta
aagccttatgaggtattcttccatgcagctggtggtagagaaggtttagttgatactgca
gtaaaaacatcacaaagtggttatatgcagagaagacttataaatgccttgcaagattta
tatgtttcatatgatggaactgttagagattctgttggtaacattgtacaatttaagtat
ggagaagatggggttgatccaatgttaacttaccatggtaaagcagtaaatattgatagg
ataatccaaaaggctaaaggtgagtaa
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