KEGG   Cellulophaga lytica HI1: IX49_00540
Entry
IX49_00540        CDS       T03279                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
clh  Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:clh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clh03016]
    IX49_00540
Enzymes [BR:clh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     IX49_00540
Transfer RNA biogenesis [BR:clh03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    IX49_00540
 Prokaryotic type
    IX49_00540
SSDB
Motif
Pfam: Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B Lactamase_B_4
Other DBs
NCBI-ProteinID: AIM59087
LinkDB
Position
complement(128589..129494)
AA seq 301 aa
MQLTVLGCHAATPRTLANPTSQTLEIKGHLFLIDCGEGTQVQLRKSKLKFSRIKHIFISH
LHGDHFFGLPGLVSTFRLLGREKELHVYGPKGIKEAITMLLKLGDSWTNYPLYFHELTSK
ESTVVFEDDKVKVSTIPLNHRIYTNGFLFQEKEAERKLNIEAVASYEIDKCYYQKIKNGK
DIILDSGAIVPNKELTFNPPKPKSYAFCSDTVFEPSIVPIIKGVDALYHEATFLDSEAEL
ATKTKHSTAKQAATIAKQANVGALVLGHYSTRYKSTNLFKQEAEEVFTPVLLGEDGKAFD
F
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgcaattaacagtactaggttgccacgcagccacaccacgcacactagctaatcctaca
tcacaaacattagagattaaaggacatttatttttaatagattgtggagaaggtacacaa
gtgcaacttagaaaaagtaagcttaagttttctagaattaagcatatttttatttctcac
ttacacggagatcatttttttggacttccgggcttggtgtctacctttaggttgttgggc
agagaaaaagaattgcacgtttacggtcctaaaggtataaaagaagcaattactatgtta
ttaaaacttggggattcctggacaaattacccgttatattttcacgagttaactagtaaa
gaatctaccgtagtttttgaagatgataaagtaaaagtatctaccatacctttaaaccac
agaatttatacaaacggttttttgtttcaagaaaaagaagcagagcgtaaattaaatata
gaagcagtagcttcttatgaaatagataagtgttattatcagaaaattaaaaacggaaaa
gatattattctagatagtggtgcaattgtgcctaataaggaacttacttttaatccgcct
aagcctaaaagttatgcattttgtagtgatactgtttttgagccaagtattgtgcctatt
ataaaaggagtagatgcattgtatcatgaagctacttttttagactctgaagcagaacta
gcaacaaaaacaaaacattctacagctaaacaagcggcaacaatagcaaagcaagcaaat
gttggtgctttggttttggggcattattctacacgttacaaatctaccaacttatttaaa
caagaggcagaagaagtttttactccagtgttattaggagaagatggtaaggcattcgat
ttttaa

DBGET integrated database retrieval system