Cellulophaga lytica HI1: IX49_02020
Help
Entry
IX49_02020 CDS
T03279
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_02020
Enzymes [BR:
clh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IX49_02020
DNA repair and recombination proteins [BR:
clh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IX49_02020
Prokaryotic type
IX49_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIM59366
LinkDB
All DBs
Position
complement(457517..458806)
Genome browser
AA seq
429 aa
AA seq
DB search
MSDKISVFWFRRDLRIEDNTALCNALKSGNPVLPVFIFDENILNELDADDARVTFIHKTI
SAINLTLKEYNSGVLCLHTTPELAWKKIVSTYNVERVFFNKDYEPYARERDQKITSFLND
KSIKVKSNKDSVIFEENDVLKNDGDPYTVYTPYKNKWLSKFTPDLIEDKKCDFKGKLLEF
NVDFPSLENLGFSASNITVEPYNLEHLDIYAEKRDFPSDDITTYLGPHLRFGTVSVRKLI
RGLDGLESVFLSELVWREFFTQILFHFPKVVTQNFRSKYDGIKWRNNKEDFEKWCTGNTG
YPMVDAGMRQLNKTGYMHNRVRMITAGFLCKHLLIDWQWGEAYFAKKLLDYELASNNGNW
QWAAGTGCDAAPYFRIFNPITQLKKFDKDFKYVKHWIPELDGFNYPQPMVEHKAARERAL
KVYKEGIED
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaatatctgttttttggtttaggagagatttaaggattgaagacaatacg
gcactgtgtaatgcattaaaatctggtaatcccgtacttcctgtttttatttttgatgaa
aatattttaaatgaactagatgcagatgatgcaagagtaacgtttatacataaaactata
tcagctataaatttaactttaaaagaatataatagtggtgtactatgcttacatacaaca
ccagaacttgcttggaaaaaaatagtaagtacatacaatgtagagcgtgttttttttaat
aaagactatgagccatatgcaagagaaagagatcagaaaataacttcatttttaaacgat
aaatctataaaggttaagtctaataaagacagtgttatttttgaagagaatgatgtttta
aagaatgacggtgatccatatacggtttatacgccatataaaaataaatggttatctaaa
tttactccagacctaattgaagataagaaatgtgactttaaaggtaaattattagagttt
aatgtagattttccttcattagaaaatttaggatttagtgcatcaaacataacggtagaa
ccatacaatttagagcatctagatatttatgcagaaaaaagagattttccgtctgatgat
ataacaacatatttaggtccacatttgcgttttggaaccgtaagtgtacgcaaattaatt
agaggtttagatggtttagaaagtgtgtttttaagtgaattggtttggagagaatttttt
actcaaatcttatttcattttccaaaggttgttacccaaaattttagatctaaatacgat
ggaataaagtggcgcaataacaaagaagattttgaaaaatggtgtacaggtaatacaggt
tatcctatggtagatgccggtatgagacagttaaacaaaacagggtatatgcataataga
gtgcgtatgattactgctggctttttatgtaagcatttattaatagattggcagtgggga
gaggcctattttgctaaaaagttgttagactatgagttggcctctaataacggcaattgg
caatgggcagcaggtactggttgtgatgctgctccgtattttagaatatttaaccctata
acacaattaaaaaagtttgataaagattttaaatacgtcaagcattggattcctgagttg
gatgggtttaattatccgcagccaatggtagagcataaagcagctagggaaagagcatta
aaagtatataaagaaggtatagaagattaa
DBGET
integrated database retrieval system
