Cellulophaga lytica HI1: IX49_04170
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Entry
IX49_04170 CDS
T03279
Name
(GenBank) helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clh03032
]
IX49_04170
03029 Mitochondrial biogenesis [BR:
clh03029
]
IX49_04170
Enzymes [BR:
clh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
IX49_04170
DNA replication proteins [BR:
clh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
IX49_04170
Mitochondrial biogenesis [BR:
clh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
IX49_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
HTH_40
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
Viral_helicase1
DEAD
AAA
AAA_24
SH3_13
AAA_5
SLFN-g3_helicase
NTPase_1
AAA_7
AAA_16
PhoH
AAA_14
nSTAND3
T2SSE
NAT10_TcmA_helicase
UvrD_C_2
nSTAND_NTPase5
TrwB_AAD_bind
Sigma54_activ_2
cobW
Motif
Other DBs
NCBI-ProteinID:
AIM59753
LinkDB
All DBs
Position
complement(941608..943293)
Genome browser
AA seq
561 aa
AA seq
DB search
MQQQKALALLKSGKNVFLTGSAGTGKTYVLNQYITYLKKRRIPVAITASTGIAATHMNGM
TIHSWAGFGIKEQLTRANLNSMKEKKYLKEHLENAKILIIDEISMLHKKQLDMVDTVLQF
FKENDEPFGGIQVVVCGDFFQLPPIGNQNEKSKDKFAFMSAAWVAAKFNVCYLTEQYRQA
NEDVLNTILNEIRIGKISKKSIEELKKAEQNTFSKDDEPTKLFTHNYDVDQINNEHLQQL
KGKIKRFKATTKGNKKLVETLKKSVLAKEELELKMHTKVMFVRNNQEQGYVNGTLGTIVS
FNDDGFPVVKTAQGKRISVKQENWGVQDDTGKVLASLDQIPLRLAWAITVHKCQGMTLDG
ALIDLSKTFEKGQGYVALSRLKNIENLKLLGFNEMALQVDGLASKADKRFLELSDEADKK
YALDNLEEEAIKFVVECGGLTNIKAIEKHAKKIIDKKIKKDSTYDVTLDYFRKKLSIEEI
ADQRGLSSGTIAGHLIKLCKDYPEEDFSFYQPKEQIIKDVEKAKSKQKKGEPVSLKAIFE
ALNKKVDYNDIKLALAFIGRE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaacaaaaagctttagcattattaaaatctggtaaaaatgtatttttaacaggt
tctgcaggtacaggtaaaacgtatgttttaaaccagtacattacctatttaaaaaaacgt
agaataccagttgctataacagcatctacaggtattgcggctacgcatatgaatgggatg
actatacattcttgggctggttttggtataaaagaacaacttaccagggctaatctaaat
tctatgaaggagaaaaagtacctgaaagaacatttagaaaatgcaaaaattttaattatt
gatgaaatatcaatgctgcataaaaaacagttagatatggtagatactgttttgcaattt
tttaaagagaatgatgagccctttggaggcatacaagttgtggtttgtggcgattttttt
cagttaccaccaataggtaatcaaaatgaaaaaagtaaagataaatttgcttttatgtct
gctgcttgggttgctgctaaatttaatgtgtgttatttaacggagcaatataggcaagca
aatgaagatgttttaaatactattttaaatgaaattagaataggaaaaatatctaaaaaa
agtatagaagaacttaaaaaagcagagcagaatacgtttagtaaagatgatgagcctacc
aaattgtttacgcacaattatgatgtagatcagattaataacgagcatttacaacaatta
aaaggtaagataaaaagatttaaggctaccactaaaggaaacaaaaaactggtagaaact
ttaaaaaaatcagtcttagctaaagaagaattagagttaaaaatgcataccaaagttatg
tttgtgcgcaacaaccaagaacaagggtatgtaaatggtacattaggtactattgttagt
tttaatgatgatggatttccggtagtaaaaacagcccaaggaaaacgaatttctgtaaag
caagagaattggggtgtgcaggacgataccggaaaagttttggctagtttagaccaaata
ccattgcgtttagcttgggcaataactgtacataaatgtcagggtatgacgctagatggt
gcgctcatagacctatctaaaacttttgaaaaaggccagggttatgtagctttatctcgt
ttaaaaaatattgaaaacctaaagttattaggttttaacgaaatggctttgcaggtagat
ggactagcttctaaagcagacaaaagatttttagaactatctgatgaagcagataaaaaa
tatgccttagataatttagaggaagaagcaattaaatttgtagtagagtgtggtggctta
accaatataaaagctatagaaaagcacgctaaaaaaataatagataagaaaattaaaaaa
gattctacctatgatgtaaccctagattattttagaaagaaattaagtattgaagaaatt
gcagatcaaagagggttgtctagtggaactatagcgggacatttaattaaattatgtaaa
gattaccctgaagaagattttagtttttatcagcctaaagaacaaataattaaagatgta
gaaaaggctaaaagcaagcagaaaaaaggagagcctgtaagtttaaaagctatttttgaa
gctttaaataaaaaagtagattataatgatattaagcttgcactagcttttattggtaga
gagtaa
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