Cellulophaga lytica HI1: IX49_05195
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Entry
IX49_05195 CDS
T03279
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
clh
Cellulophaga lytica HI1
Pathway
clh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IX49_05195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_05195
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IX49_05195
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IX49_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIM59942
LinkDB
All DBs
Position
1147288..1148007
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AA seq
239 aa
AA seq
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MQVTTKAIVLSALKYGDNSLIVKAYTLSDGLKSYLLKGVLSSKKGKVKAAYFQPLTQLEL
IAVHKNKGTLESVREAKTSYHYQTLHSNITKNAMTQFLAEMLSNSLLEEEPNENLFNYIE
AALQWLDTESQIANFHLHFLLSITKYLGFYPDSKNNSFLYFDLLEGGFTNKPSLNPVIQG
TNLNYFKTFLGINFDAIHTIKMNKTDRQELLKSLILYFELHLQGFRKPKSLVILNEIFR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaccacaaaagctattgtactttcagcgcttaaatatggcgacaatagttta
attgttaaagcatatacattatcagacggtctaaagtcttatttattaaaaggagtttta
tcttctaaaaaaggaaaggtaaaagcagcatactttcagccgctaacacaattagagctt
attgcagtacataaaaacaagggtactttagaaagtgttagagaagccaaaacaagttac
cactaccaaacactacacagtaatattactaaaaatgcaatgactcagtttttagcagaa
atgttaagcaacagcttgctagaagaagaacctaacgaaaacctttttaattacatagag
gctgctttacaatggctagacacagaatcacaaatagcaaattttcaccttcattttttg
ctgagcattaccaaatatttaggcttttatcctgacagcaaaaacaatagttttttatat
tttgatttgcttgaaggaggctttaccaacaaaccctctttaaacccagttatacaaggc
acaaatttaaattactttaaaaccttcttaggcataaattttgatgcaatacatacaatc
aaaatgaacaaaactgacagacaagagttgttaaaatcgcttattttatattttgaatta
cacttacaaggatttagaaaaccaaagtctcttgttattttaaatgaaatttttcgttag
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