Cellulophaga lytica HI1: IX49_06285
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Entry
IX49_06285 CDS
T03279
Name
(GenBank) glycan metabolism protein RagB
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clh02000
]
IX49_06285
Transporters [BR:
clh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IX49_06285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AIM60148
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Position
1399792..1401342
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AA seq
516 aa
AA seq
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MKLYKKHISPLLILAFIASVFVGCSDKLDEPQENNNFAGGTDFTKTEDMILSIIGVYDAF
QSRGWEQPLLISVRGDDVNAGGLGDQQDFAETDLFNYNKDYWMYNSLWENVYVDVITAHT
AMEQIARYQEFADADGIDKGNQYIAEAKVLRGMMLFQISQVWGDIFIPESSDTGALLNVT
ELPTKDEVMQHISNQMDEAISFLPDARPNERIDIPGGVTKYTALAIKALANQELKNYQEV
AAATGQIINSGKFSLFTDYYELFKTPGKLSDESILDLQYSDFGQGEGDREGHLFAPYGPQ
NWTPAVTGAASGWGFYEPSLKFIKFMLDRGEAVRLETSVLFTDRGIAELQTDPNYATLPS
FVKNTTRDGDVINDYSRALFSSGKHYLPSNQLIEGRTEYGSNKNYNVIRYAEILLMYAEA
ITQGATATSITADNAVNLVRERAGMPSLTGVTLDNVIDEKFAELGMEWGKRYYDMVRLGR
FSELNYDGRTFSEDKVYLPYPQPQVDQFPILGNSSN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtataaaaaacatatatcacctctacttatactagcatttattgcatcagta
tttgttgggtgttcagacaagttagatgagccacaggaaaacaacaactttgctggtggt
acagattttacaaaaaccgaggatatgatattgtctatcattggtgtttacgatgctttt
caatctcgtggatgggaacaaccattattaatttctgttcgtggagacgatgttaatgct
ggtggtttaggtgaccaacaagattttgctgaaactgacctttttaattataacaaagat
tattggatgtacaattctctttgggaaaacgtatatgtagatgttattacagcacataca
gctatggaacaaatagcacgttaccaagagtttgcagatgcggacggtattgataaagga
aaccaatacattgcagaagctaaagttttaagaggaatgatgttatttcaaatttctcag
gtttggggagatatttttattccagaatcttcagacactggcgcccttttaaacgttaca
gagttacctactaaggatgaggttatgcaacatatatctaaccagatggatgaagcaatt
tcatttttaccagacgcaagacctaatgagcgtatagatatccctggaggggttacaaaa
tatactgctttagctataaaagcattggctaaccaagaacttaaaaattaccaagaagtt
gctgctgcaactggacaaataattaactctggtaagtttagtttatttacagattattat
gagctttttaaaactcctggtaaattaagtgatgagagtattttagatttacaatattca
gattttggacaaggtgaaggtgatagagaaggacatttgtttgctccttatggcccgcaa
aactggactccggctgttactggtgctgcatctggctggggtttttatgagcctagctta
aaatttataaaatttatgttagaccgtggagaagctgtgcgtttagaaactagcgtacta
tttacagatcgcggtattgcagagcttcaaacagatccaaattacgctactctaccaagt
tttgtaaaaaacacaaccagagatggtgatgttataaacgactattctagagccctattt
tctagtggtaaacactatttgccatcaaaccaattaatagaaggcagaacagaatacggt
agtaacaaaaactacaatgttatacgttatgcagaaattttattaatgtatgcagaagcc
attacacaaggagcaacagcaacatctataactgcagataatgctgtaaacttggtaaga
gaaagagctggtatgccatctcttactggtgtaacattagacaatgtaatagatgaaaaa
tttgccgaactgggtatggaatggggcaaacgctattacgatatggttagactaggcaga
tttagcgagctaaactatgacggaagaacattttctgaagacaaggtttaccttccttac
ccacaaccacaggtagaccaatttccaattttaggaaactcatcaaactaa
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