Cellulophaga lytica HI1: IX49_10895
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Entry
IX49_10895 CDS
T03279
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_10895
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IX49_10895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
AAA_30
ResIII
Zot
FtsK_SpoIIIE
AAA
TrwB_AAD_bind
AAA_10
TraG-D_C
SLFN-g3_helicase
AAA_7
AAA_19
CbiA
nSTAND3
Hydrolase
SRP54
AAA_6
Zeta_toxin
T2SSE
AAA_18
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIM61006
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Position
2417912..2419420
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AA seq
502 aa
AA seq
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MSTKEKFLADIEKGYATKGDFITMGAGIVDGETVTNAFVKVPLKTLNRHGLIAGATGTGK
TKTLQVLAENLSDKGVPVMLMDLKGDLSGIAQPSAGHPKIDERHAKIGLPFNAKSFPVEI
LSLSEQDGVKLRATVSEFGPVLLSRILDLTVTQEGIVAVIFKYCDDNKLPLLDLKDFKKV
LQYATEEGKAEFKESYGRISSASTGSILRKIIELEQQGADLFFGEKSFEVDDLTRIDENG
RGYINILRLTDIQDRPKLFSTFMLSLLAEIYDTFPEQGDSDKPELVLFIDEAHLIFDEAS
KALLNQIESIVKLIRSKGIGVYFVTQNPADVPEDVLAQLGLKVQHALRAFTAKDRKAIKL
AAQNYPDSEYYNTEDVLTSLGIGEALISALDEKGRPTPLAATMLRAPMSRMDVLTAKELK
EVIDSSSLVKKYNDSIDRESAYEMLNDKIEKAEQIAAKEKEKPAAKRTSSRSRSTRQNPI
VKVLTSATFIRGMLGVLKKVLR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaggaaaagtttttagcagatatagaaaaaggatacgctacaaaaggagac
tttataactatgggcgctggtattgtagacggtgaaaccgttacaaatgcgtttgtaaaa
gtacctttaaaaacacttaatcgtcacggtttaattgcaggtgctacaggtacaggcaaa
acaaaaacattacaggtattggcagaaaacttgtcagacaaaggtgtgccagttatgtta
atggatttaaaaggagatttaagtggtatagcacaaccaagtgcaggacatcctaaaata
gatgaacgccatgctaaaataggtttgccatttaacgctaaaagttttcctgtagaaatt
ttatcgttgtctgagcaagatggtgtaaagttaagagctacagtatctgaatttggtccg
gtgttgctttctagaattttagacttaacagtaacgcaagaaggtattgttgcagttatt
tttaagtattgtgatgataataaattgccacttttagaccttaaagattttaaaaaagta
ctacagtacgctacagaagagggtaaggcagagtttaaagaaagctatggaagaatttct
tctgcttctacaggttcaattcttagaaaaataatagagttagaacagcaaggagccgat
ttattttttggtgaaaaatcttttgaggtagatgatttaactaggattgatgaaaacggt
agagggtacattaatattttaagattaacagatatacaagataggccaaagttgttttca
acttttatgctaagtctattggctgaaatttatgatacttttcctgaacaaggagatagt
gataaaccagaactagtattgtttatagatgaggctcacttaatttttgatgaagcatct
aaagcattattaaaccagatagaaagtatagtaaaattaatacgttctaaaggtattggt
gtatattttgtaacacaaaaccctgcagatgtaccagaagatgttttggcacaactaggg
ttaaaagtgcaacacgcattacgtgcatttacagcaaaagatagaaaagctattaagtta
gctgcgcaaaattacccagatagtgagtattacaatacagaagatgtattaacatcttta
ggtataggagaagctttaatatctgctttagatgaaaaaggaaggccaacaccattagca
gctacaatgttgcgtgcacctatgagccgtatggacgttttaactgcaaaagagttaaaa
gaagttatagactcatcttctctagttaaaaaatacaatgatagtatagatagagaaagt
gcttatgaaatgctaaatgataaaattgaaaaggcagagcaaatagcagcaaaagaaaaa
gaaaaaccagcagcaaaacgtactagtagtcgttctagaagtacaaggcaaaaccctatt
gtaaaagtgttaaccagcgctacttttataagaggtatgttaggtgtgcttaaaaaagtg
ttacgctaa
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