Cellulophaga lytica HI1: IX49_11065
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Entry
IX49_11065 CDS
T03279
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
clh
Cellulophaga lytica HI1
Pathway
clh02020
Two-component system
clh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX49_11065
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IX49_11065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clh03000
]
IX49_11065
Transcription factors [BR:
clh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IX49_11065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
BREX_BrxC_4th
Crp
DGCcoil
DUF2790
Motif
Other DBs
NCBI-ProteinID:
AIM61036
LinkDB
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Position
2446376..2446939
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AA seq
187 aa
AA seq
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MEEKLRDHIQNLIPLTDDEFSFVLSHFSFEKYKKNDFLIQVEDNVKCCYFVVSGLLKLVY
DDTNGKQHIVSFAMEDWWESDFSAYFTETKAKMSLQCIEDTMVFSLSFKNYQKLLSQLPK
MERFFLQKSNAGYISSQNRILSFLTSNAQQRYKQLLKQYPQLFQRVPKTLLASYLGVSRE
TLSRLSS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagttaagagatcatattcaaaatttaatacctcttacagatgatgagttt
tcatttgttctatcacatttttcatttgaaaaatataaaaaaaatgattttcttattcaa
gtagaagataatgtaaagtgttgttattttgttgtttcgggacttttaaaattagtttac
gatgacacaaatgggaaacagcatattgtttcatttgcaatggaagactggtgggaaagt
gacttttcagcttattttacagaaactaaagctaaaatgtcattacagtgtattgaggac
actatggtattttctttaagctttaaaaattatcaaaaactattatctcaattacccaaa
atggagcgtttttttctccaaaaatctaacgcaggatacatttcttcacaaaatagaatt
ttatcttttttaacttcaaatgctcagcaaaggtataaacagttacttaaacaatatcct
caactatttcagcgagttcccaaaactcttttagcttcatatttaggtgtttcacgtgag
acacttagtcggctttcttcttaa
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