Cellulophaga lytica HI1: IX49_11570
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Entry
IX49_11570 CDS
T03279
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clh03016
]
IX49_11570
Enzymes [BR:
clh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IX49_11570
Transfer RNA biogenesis [BR:
clh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IX49_11570
Prokaryotic type
IX49_11570
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIM61129
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All DBs
Position
2548612..2549367
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AA seq
251 aa
AA seq
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MRYFVAFSYFGAAYHGWQIQPNAITVQEELEKAFSTLLKEKISLMGAGRTDAGVHAKQMY
AHFNTTPISNTVDLMRRLNSFLPDDIAIQNIYEVPEDAHARFNATERTYEYLITTQKDPF
SIATTHYIKQKLDIEKMNKAAQLLLGKQDFECFSKSKTDVKTYYCTVKKAIWEQKEDKFV
FTITADRFLRNMVRAIVGTLLDVGTGKITIDHIHTIIASKSRAEAGTSVPAKALYLTQVL
YPKNIIKVKNV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttgtagcattttcatactttggagcagcgtatcacgggtggcaaatacag
ccaaacgctataactgtacaagaagagttagaaaaagcatttagtacgcttttaaaagaa
aaaatttctttaatgggagctggcagaacagatgcaggtgtacacgctaagcaaatgtat
gcccattttaatacaactcccatatctaatacagtagatttaatgcgtaggctaaattct
tttttgccagatgatattgctatccaaaacatttatgaagttccagaagatgcccacgct
aggtttaatgcaacagaacgtacatacgagtatttaattaccacacaaaaagaccctttc
tctatagcaacaacacattatataaagcaaaaattagatatagaaaaaatgaataaggca
gcgcaattgctgttaggtaaacaagattttgagtgtttttctaaatctaaaacagatgtt
aaaacctattattgcactgttaaaaaagctatttgggaacaaaaagaagataaatttgtg
tttacaattaccgcagataggtttttgcgcaatatggttagagccattgtgggtacactt
ttagatgtgggaacaggtaaaattactatagaccatatacacaccataatagctagtaaa
agtagggcagaggcaggtacttctgtgccagcaaaagcattatatttaacacaggttttg
tacccaaaaaatattatcaaagtaaaaaatgtctaa
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