Cellulophaga lytica HI1: IX49_12085
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Entry
IX49_12085 CDS
T03279
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
clh
Cellulophaga lytica HI1
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clh03032
]
IX49_12085
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_12085
Enzymes [BR:
clh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IX49_12085
DNA replication proteins [BR:
clh03032
]
Prokaryotic type
DNA Topoisomerases
IX49_12085
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IX49_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIM61223
LinkDB
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Position
2684080..2686635
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AA seq
851 aa
AA seq
DB search
MAEGEKIIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMHELGVRSNS
AHKKSARIVGEVLGKYHPHGDTSVYDSMVRMAQEWSLRYMLVDGQGNFGSIDGDSPAAMR
YTEARMRKIADDMLADIEKDTVDHQLNFDDSLKEPTVLPARIPNLLVNGASGIAVGMATN
MPPHNLSEVVDGTVAYIDNKDIEIDELITHIKAPDFPTGGIIYGYDGVREAFKTGRGRVV
MRAKATFEEVQGRESIVVTEIPYQVNKADMIKKTADLINDKKIEGISTIRDESDRNGMRI
VYILKRDAIPNIVLNTLFKYTALQTSFSVNNIALVNGRPQLLNVKEMIHYFVEHRHEVVV
RRTKFELKKAEDRAHILEGLIIASDNIDEVIAIIRGSSNADEARENLIKRFELSEIQAKA
IVEMRLRQLTGLEQDKLRAEYDEIIKTIADLKDILANEERRMQIIKDELLEVKEKYGDER
RSEINFAGGDLSIEDMIPDEQVVITISHAGYIKRTPLSEYKTQNRGGVGQKASSTRNEDF
LEHLFVGTNHQYMLFFTQKGKCFWMRVYEIPEGSKTSKGRAIQNLINIEQDDKVMAFICT
QDLKDEEYVNSHYVIMATKKGTVKKTSLEQYSRPRLNGINAIGIKEGDELLEAKLTTGTS
QIFLGLKSGKAIRFEESKTRPMGRNASGVRGITLADDNDEVVGMVSVHNFDDDILVVSEK
GYGKRSSLEDYRITNRGGKGVKTISVTDKTGGLVAIKNVTDSDDLMIINKSGIAIRMGVE
DLRVMGRATQGVRLINIKGKDSIAAVAKVMKDEDAVDEEGLEGEAPDTAEGDASTEDGTA
LDNDTTESTEE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggggaaaaaattattccaataaacatagaagacgaaatgaaatctgcctac
attgattattcaatgtcggttattgtatcacgtgccttaccagatgtaagagatggttta
aagccggtacacagaagggttttatacggtatgcatgagttgggtgttcgttccaatagc
gcacataaaaaatctgcccgtattgtgggtgaggttttaggtaagtatcaccctcacgga
gatacttctgtttatgattctatggtacgtatggctcaagagtggagtttacgttatatg
cttgtagatggccagggtaactttggttctatagatggtgatagccctgcagcaatgcgt
tatacagaagcacgtatgcgtaaaattgccgatgacatgttggcagatatagaaaaagac
actgtagatcaccaattaaactttgacgattctttaaaagaaccaacagttttacctgca
agaattcctaacttattagtaaacggagcctctggtattgcagttggtatggcaacaaat
atgccaccacacaatttatctgaagttgtagatggtactgttgcatacatagataataaa
gatatagaaatagatgagttaataacacatataaaggctccagattttccaacaggaggt
attatatatggttatgacggcgttagagaagcttttaaaacaggtagaggtagagttgta
atgcgtgcaaaagctacttttgaagaagttcagggtagagaatctattgtggttacagag
ataccttaccaggttaataaggctgatatgattaagaaaacagccgatcttattaacgat
aaaaaaattgaagggatttctactattagagatgagtctgatagaaatggtatgcgtatt
gtatacattttaaaaagagatgctatacctaatattgtattaaatacattatttaaatat
acagcactacaaacttcctttagtgtaaacaatattgccttagtaaacggaagaccacag
ttacttaatgttaaagaaatgattcactattttgtggaacacagacatgaagtagttgta
cgtagaactaagtttgaacttaaaaaggcagaagatagagctcacatattagagggttta
attattgcatctgataatatagatgaagtaattgccataattagaggttcttctaacgca
gatgaagcaagagagaacttaattaaaaggtttgagctgtctgaaatacaagctaaagca
attgtagaaatgcgtttgcgccaattaacaggtctggaacaagacaagttaagagcagag
tatgatgagattataaaaaccattgcagacttaaaagatattcttgctaatgaagaacgc
agaatgcaaattattaaggatgaacttttagaagttaaagagaaatacggagacgaaaga
agatctgaaattaattttgcaggaggtgatttaagtattgaagatatgatacctgatgag
caagtggtaataaccatatctcatgcaggatatattaaacgtactcctttatctgaatac
aaaacacaaaatagaggtggagttgggcaaaaagcatcatcaacaagaaatgaagacttt
ttagaacacttatttgtaggtactaaccaccaatatatgttgttctttacacaaaaaggt
aaatgtttctggatgcgtgtttatgaaataccagaaggtagtaaaacatctaaaggtaga
gcaatacaaaatctaattaatatagagcaagatgataaagtaatggcatttatatgtact
caagatcttaaagatgaagagtacgttaacagtcactacgttattatggcaaccaaaaaa
ggtactgttaaaaagacctctttagagcaatactcaagacctcgtttaaatggtattaat
gccataggtataaaagaaggagatgagttgctagaagctaaactaacaacaggtactagt
caaatatttttaggattaaaatctggtaaagccattaggtttgaagaaagtaaaacaaga
ccaatgggtagaaatgcctctggtgttagaggtattacattagcagatgataatgatgaa
gttgtgggtatggtatctgtacacaactttgatgatgatattttagtagtttctgaaaaa
ggatacggtaaacgttctagtttagaagattatagaattactaatagaggcggtaaaggt
gttaaaaccattagcgttacagataaaacaggtggtttagtagctattaaaaatgttacc
gattctgatgatttaatgattattaataaatctggtattgcaatacgtatgggtgtagaa
gatttacgtgtaatgggtagagcaacacagggtgttaggttaataaacattaaaggaaaa
gattctattgcagcagttgcaaaagttatgaaagacgaagatgctgtagatgaagaaggt
ttagagggagaagctcctgatactgcagaaggtgatgcttctacagaagatggcacggct
cttgataatgatacaacggaatcaactgaagaataa
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