Cellulophaga lytica HI1: IX49_12790
Help
Entry
IX49_12790 CDS
T03279
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
clh
Cellulophaga lytica HI1
Pathway
clh00061
Fatty acid biosynthesis
clh00071
Fatty acid degradation
clh01100
Metabolic pathways
clh01212
Fatty acid metabolism
clh02024
Quorum sensing
clh04146
Peroxisome
Module
clh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IX49_12790
00071 Fatty acid degradation
IX49_12790
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IX49_12790
09145 Cellular community - prokaryotes
02024 Quorum sensing
IX49_12790
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
clh01004
]
IX49_12790
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clh04147
]
IX49_12790
Enzymes [BR:
clh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IX49_12790
Lipid biosynthesis proteins [BR:
clh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IX49_12790
Exosome [BR:
clh04147
]
Exosomal proteins
Exosomal proteins of breast milk
IX49_12790
Exosomal proteins of breast cancer cells
IX49_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIM61352
LinkDB
All DBs
Position
complement(2873498..2875267)
Genome browser
AA seq
589 aa
AA seq
DB search
MQEVTRLFDFPYYQLKKYNLQQSLATKYDDKWEYMSTQEYVDKANTMSRALLRLGVSKND
KIAVISSTNRMEWNVMDIGILQLGAQNVPVYPTISEEDYAYVLNHSEAKYCFISCTDVFE
KIKKIKDQVPSLIEIYSFDSLEGCKNWSEVLDLGIDESNQAEVEKLKDDVKPTDLATLIY
TSGTTGRPKGVMLSHNNLVSNALESFKRIPIELGKSRALSFLPLCHVYERMLIYLYQYCG
AAIHYAPIDQISEYAQEVQPQVMTAVPRLLEKVYDKIIAKGTALTGIKKKLFFWAVEVGL
EYKPYQQNGWWYEKKLGLARKLIFSKWKAALGGQVAVMASGSAALQPRLARVFNAAGFGV
MEGYGLTETSPVISVNDMRNGGFRIGTVGKPLERTEVKIAEDGEICIKGPQVMMGYYKDE
AKTSEVLIDGYFHTGDIGEIDADGFLKITDRKKEMFKTSGGKYVAPQLLENRCKQSRFID
QVMVIGEGEKMPAAFIQPDFDFVKEWAKRYNITITSNEDLVTNEKVIARFQEEVDAANEN
FAKWEKIKQFRLTPDVWSIEGGHVTPTLKLRRKIIKEKYKALYNDIYGY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagtaactagattatttgattttccttactatcaattaaaaaaatacaaccta
caacaatcattagctacaaaatatgatgacaagtgggaatatatgtctacccaagagtat
gtagacaaagcaaatacaatgagtagagcactgttaaggttaggtgtttctaaaaatgat
aaaattgctgtaatatcctctaccaacagaatggaatggaatgttatggacattggaatt
cttcaacttggtgcacaaaacgtacctgtttacccaacaatttctgaagaagattatgca
tatgtactgaatcattctgaagctaaatattgctttatttcatgtacagacgtttttgag
aaaataaaaaaaataaaagaccaagtaccttcacttatagaaatttattcttttgacagt
ttagaaggatgtaaaaattggtctgaagtattagatcttggtatagacgagtctaaccaa
gcagaagtagaaaaattaaaagatgacgttaagccaacagacttagctacattgatatat
acttctggtacaacaggaagaccaaaaggtgttatgctatcgcacaacaaccttgttagt
aatgctctagaaagctttaagagaatacctatagaactgggtaaatctagagctcttagt
tttttaccattatgccacgtatatgagcgtatgttaatttacctataccaatattgtggt
gcagccatacattatgctcctatagatcaaattagtgagtatgcacaagaagtacaacca
caagtaatgacggctgtacctagattattagaaaaagtatacgataaaattattgccaaa
ggaacagctttaactggcataaaaaagaaactattcttttgggctgtagaggtaggttta
gagtataaaccttaccaacaaaatggctggtggtatgagaaaaaattaggtttagcacgt
aaattaatttttagcaaatggaaagctgccttaggtggccaagttgctgttatggcttct
ggtagtgctgcactacaaccaagacttgcacgtgtatttaacgcagctgggtttggcgtt
atggaaggttatggactaacagaaacatctcctgtaatatctgtaaacgatatgcgtaat
ggcggatttagaattggtaccgtaggtaaaccattggaacgtacagaagttaaaatagca
gaagacggagaaatttgtattaaaggcccacaagttatgatggggtattacaaagatgaa
gctaaaacttctgaagtacttatagacggctattttcatactggcgatataggagaaata
gatgcagatggattcttaaaaattacagatcgtaaaaaagaaatgtttaaaacatctggt
ggtaaatatgtagccccacaattattagaaaacagatgtaaacaatcaagatttatagat
caagtaatggtaattggcgaaggtgaaaaaatgcctgctgcttttattcagccagatttt
gattttgtaaaagaatgggctaaacgttacaacattacaataactagtaatgaagacttg
gttacaaatgaaaaagtaatagcacgttttcaagaagaagttgatgctgccaacgaaaac
tttgccaaatgggaaaaaattaaacaatttagacttactccagatgtttggagtattgaa
ggcggccacgttactcctaccctaaaattgcgtagaaaaataattaaagagaaatacaaa
gctctttacaacgatatttacggatactaa
DBGET
integrated database retrieval system
