Cellulophaga lytica HI1: IX49_14245
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Entry
IX49_14245 CDS
T03279
Name
(GenBank) thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
clh
Cellulophaga lytica HI1
Pathway
clh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IX49_14245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
clh02042
]
IX49_14245
Bacterial toxins [BR:
clh02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
IX49_14245
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GFIT
Motif
Pfam:
Thiol_cytolysin
Motif
Other DBs
NCBI-ProteinID:
AIM61631
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Position
3213411..3215369
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AA seq
652 aa
AA seq
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MKQMHSYRSKTNLLMFLFLLASVLSCSKDDDSQQKNNESEKSSFNAVLAVGEDLEDPIQQ
QLEVSSTQSEQAITTTDDQGNSTVENWSCTTTTYDLKRESGGEDGFPLFSPNAKIIYPGS
LLQGKTLKNTTPDVIAVGRAGGTVSYDLVNGNISSTVTVDVVSKSSIQDAMNQIIAASPD
VTPANFTFEYEQVQSREALAISMGLDVKSAFVKAGASFDFKNGDDKNRILVKLKQTFYTM
SMNLPTSKDDLFADTVTPEDLAKYVQEDNPATYISDVTYGRVYYMLIETSSSYQELNVAA
NASFGVFSTKVKAELEVDHLKELKNVNIKVIAFGGDTESTISTIGETNLSSLVSLLSKSA
NIGSGLPISYVVRSVNTNQIVGIQLATQYNETNCEPLFDNGEPIQTKHWRGNILNKMGGV
GAAFERNKGEFILINTSGDKYMRSFNGALEGPFSVTDLFGGEYPFFTGDKDSGEFDGIGA
IVNIRNNSKEDSIDNERQFLAVSKSGLQFKYASGNSWESFTSIADLSVEKINTIGDNPFG
VSGIGAVLNVFYEVEDKETGYYKSSLHFFNKVGTKQTLFWSGSRYGKGGEISHSYDLTST
SSQYKNIPFTAIGAALRFDVGGSKKYIIFDITGTKYIVSSNNTGDYSPIFIL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatgcattcatatagatcaaaaacaaacctactaatgtttttgtttctatta
gcgtcagtattatcttgtagtaaggatgatgattctcagcaaaaaaataatgaatccgaa
aagagtagttttaatgctgttcttgctgttggtgaagatttagaagatccaatacaacaa
cagctagaggtttcttctacacaaagtgagcaagcaattactacaacagacgatcaaggt
aactcaactgtagaaaactggagttgcactacaactacttatgatttaaaaagggaatct
ggtggagaagatggttttcctttatttagtccaaatgctaaaataatttatccaggtagc
ttgttacagggaaaaacacttaaaaatacaactccagacgtaatagctgtaggtagagca
ggtgggacggtatcttatgatttggttaacggtaatatatctagtactgtaactgtagat
gtggtgtctaaaagtagtatacaagatgctatgaaccagattattgcagcatcaccagac
gtaacgccagcaaattttacttttgagtatgaacaagtacaaagtagagaggctttagct
attagtatgggattggatgttaagtctgcttttgtaaaagcaggtgctagttttgatttt
aaaaacggagatgataaaaatagaattttagtaaaattaaaacaaacgttttatactatg
tctatgaacttgccaactagtaaggacgatttgtttgcagacacagtaactccagaagat
ttagcaaaatatgtgcaagaagataatcctgccacatacattagtgatgttacctatggt
agggtttattatatgttaatagaaacaagctcatcttaccaagaacttaatgtagctgct
aatgctagttttggcgtttttagtacaaaagtaaaagcagaattagaagttgatcactta
aaagaattaaaaaatgttaatataaaagtaattgcatttggcggagatacagagtctacc
atttctacaataggagaaaccaatttaagttctctagtaagtttgctatcaaaaagcgca
aatattgggtctggtttaccaataagttatgtagtacgtagtgtaaatacaaatcaaata
gttggtatacaacttgctacacagtataatgaaactaattgtgagcctctttttgataat
ggcgaaccaatacagacaaagcactggagaggcaatattttaaataaaatgggaggcgtt
ggtgcagcttttgagcgtaataaaggagagtttatacttataaatacgtctggagataaa
tatatgcgcagttttaacggcgctttagaaggtcctttttctgtaactgatttgtttggt
ggcgaatacccattctttactggtgataaggacagtggagagtttgatggtataggagct
attgtaaatattagaaacaatagtaaagaagatagcatagataatgaaaggcaattttta
gcagtttcaaaaagtggtttgcagtttaaatacgctagtggaaattcttgggaaagtttt
actagtatagcagatttatctgttgaaaaaataaacactataggggataatccttttggt
gttagtggcattggagcagtattaaatgttttttacgaggtagaagacaaagagaccggt
tattataaaagttcattacacttttttaataaggttggtactaaacaaactttgttttgg
tcaggaagtagatatggaaaaggtggagagattagtcattcatatgatttaacttcaact
tctagtcagtataaaaacataccttttactgctattggtgcggcattaagatttgatgtt
ggaggcagcaaaaaatatataatatttgatataactggtacaaaatacatagtttctagt
aataatacgggtgattattctccaatttttattctctaa
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