Cellulophaga lytica HI1: IX49_14250
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Entry
IX49_14250 CDS
T03279
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
clh
Cellulophaga lytica HI1
Pathway
clh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IX49_14250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_14250
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IX49_14250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_21
COG3_N
Rad17
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIM61632
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Position
complement(3216107..3218278)
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AA seq
723 aa
AA seq
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MHKIHPKTLQDLEFNTVLEHINLRCSTELGKELALEIAPFSDKEEIIKQLGKTNEYVASY
DNENRIPNHGFDTITKELHLLKIENATLEIGGFKKISSICNTVVIHTKFFKKFKEYYPLL
HSYSETLNVLPEIPNAIDAVIDKFGEVKDKASSKLYDLRREINAVKGKINGSFISALNSY
NSADYLDEIRESVVDNRRVLAVKAMYRKKVKGAVMGASKTGSIVYIEPEATLRHSRELNN
LEYDEKEEVNRILKELTAAIKPFDYVLASYQEYLAQTDVTAAKAKYAQDTKSLLPKISEE
REMYLRDAYHPLLYLTNTRKNEKTWPQTIELKQDNRIIVISGPNAGGKSITLKTIGLLQV
MLQSGMLIPVHERSTVCLFEKILTDIGDNQSIENHLSTYSYRLKNMNSFLKKCNDKTLFL
IDEFGTGSDPELGGALAETFLEVFYDRGAYGVITTHYANLKMLANELPHATNANMLFDAK
SLEPTFKLVLGQAGSSFTFEVAQKNGIPYSLINKAKKKIERGKVRFDATIAKMQKERSKM
EKTGSRLQEEESKARQESRRLEELNTKIKSKLENYQELYDHNQRMIYLGNKVNDAAEKYF
QDKKKKVVISELLRIVETENSKRKKKTAKEVKAQKAKKKLVEQEVAKKVEVIREKKKVEK
KKAIVKEKLKPKYIFKVGDRVRLLDGKAVGSIDTLEKNKAVVNYGLFTTSVSVDKLELVQ
AKK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaattcaccctaaaacacttcaagacctagagtttaataccgtattagaacac
attaacttgcgctgtagtacagaactaggtaaagagttggctttagaaatagctcctttt
agtgataaagaagaaattataaagcaattagggaaaactaatgagtatgtagcgtcttat
gataatgaaaaccgaattcctaatcacggttttgatactattacaaaagaattacattta
ttaaaaatagaaaatgcaaccttagaaattggaggctttaaaaaaattagcagtatttgt
aatactgtagttatacatactaagttttttaaaaaatttaaagaatattatccactatta
catagctattctgaaacgctaaatgtgttgccagaaataccaaatgcaattgatgctgtt
atagataagtttggtgaggttaaagataaagcttctagtaaactgtatgatttacgaaga
gaaattaatgcggtaaaaggtaaaattaatggtagttttatatctgcattaaactcttat
aactcggcagattatttagatgaaattagagaatctgttgtagataacaggcgtgtttta
gctgtaaaagcaatgtaccgcaaaaaggtaaaaggtgccgttatgggagcttctaaaact
ggtagtattgtttacatagaacctgaagctacattgcgccatagtagagaattaaacaat
ttagaatacgatgaaaaagaggaagtaaatcgtattttaaaagaattaacagctgctata
aaaccttttgattacgtattggccagttaccaagaataccttgcacagaccgatgttact
gctgcaaaagccaaatatgcacaagatacaaagtctcttttaccaaaaataagtgaagaa
agagaaatgtatttgcgagacgcttaccacccactcttatacctaacaaataccagaaaa
aacgaaaaaacttggccacaaactatagagctaaaacaagacaacagaattattgtaatc
tctggccctaatgctggtggtaaaagtattaccttaaaaacaattggtttgctacaagta
atgttgcaaagcggtatgctaattccggtgcatgaacgtagtacggtctgtttatttgaa
aaaatattgacagacattggagataatcaatctatagaaaaccacttaagtacctatagt
tataggcttaaaaatatgaacagctttttaaaaaagtgtaatgataaaacacttttttta
attgatgaatttggtacaggtagtgatcctgaacttggtggtgcattggcagaaactttt
ttagaagtcttttatgaccgtggtgcttatggtgtaattaccacacattatgcaaaccta
aaaatgttagcaaatgaattaccgcacgctacaaatgccaatatgttgtttgatgctaaa
agtttagaaccaacttttaaacttgttttagggcaggcaggtagttcttttacttttgaa
gttgcacaaaaaaacggtattccctatagcttaattaataaagctaaaaagaaaattgag
cgaggtaaagtacgttttgatgctactattgctaaaatgcaaaaagagcgaagcaaaatg
gaaaaaactggttctagattacaagaagaagaaagtaaagctagacaagaatctagacga
cttgaagagctaaatacaaaaattaaatctaaactagaaaattaccaagaattgtatgac
cataaccaacgtatgatttatttaggtaataaggttaatgatgctgcagagaaatatttt
caggataagaaaaagaaagtagtaatatctgaactattacgcattgtagaaactgaaaat
agtaaaagaaaaaagaaaacagctaaagaagtaaaagcacaaaaagctaaaaagaagtta
gtagaacaagaagtagccaaaaaggtagaggtaatacgcgaaaagaaaaaagtagaaaag
aaaaaggctattgtaaaagaaaaactaaaacctaagtatatttttaaagttggtgacaga
gtccgtttattagatggtaaagctgttggtagtatagatactttagaaaagaataaagct
gttgtaaattatggattatttactactagtgtaagtgtagataaattagagttggtacag
gctaaaaaataa
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