Cellulophaga lytica HI1: IX49_16590
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Entry
IX49_16590 CDS
T03279
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clh
Cellulophaga lytica HI1
Pathway
clh03030
DNA replication
clh03430
Mismatch repair
clh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IX49_16590
03430 Mismatch repair
IX49_16590
03440 Homologous recombination
IX49_16590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clh03032
]
IX49_16590
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_16590
Enzymes [BR:
clh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IX49_16590
DNA replication proteins [BR:
clh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IX49_16590
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IX49_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
Rv2179c-like
DUF5417
DHOase
Motif
Other DBs
NCBI-ProteinID:
AIM62058
LinkDB
All DBs
Position
3727267..3728631
Genome browser
AA seq
454 aa
AA seq
DB search
MYVILDIETTGGKFNEEGITEIAIHRFDGHKVVDKFISLVNPEKEIQPFVVKLTGINDKM
LRTAPKFYEIAKRIVEITEDAVLVAHNAQFDYRILRTEFRRLGYNFERKTLCTVNLSKEL
IPDKESYSLGKLVRSLGIPVSDRHRANGDALATLQLFKLLLAKDSNKSIIKTVIKEGSMG
ELSDRQINLVEQLPNDTGVYYMYDKDGDLIFLGRSTDIKKKVNKHFTGVSNVAKKLQKQT
RKVTFEKTGNDLIATLKENEELRRVKPKYNSSIRKKLFNYGVFIKENKDGYLSLFIDKTT
TTDQTIGTFSSYIAAKNFVHKTTKEFTLCNKVNYISEAKTNCGNYEDGTCNGACIKKEAT
EVYNARVKQVIETYSLAGKNILIKDKGREIGEYSAILIKNGEFKGYGYYNLNHQINNIHI
LESIITNMKSTQNTIHLILTYLRKNKRVQQIQLH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtaatcttagatattgaaaccacaggtggtaaatttaatgaagaaggaataaca
gagattgctattcatagatttgatggccataaagttgtagataaatttattagtttagtt
aatccagaaaaagaaatacagccttttgtagtaaaacttactggcattaatgacaaaatg
ctacgtaccgctcctaagttttatgaaatagccaagcggattgtagaaattacagaagac
gcagttcttgtagcacataatgcacagtttgactacagaattcttagaaccgagtttagg
cgtttaggctataattttgaacgcaaaaccttgtgtaccgttaacctatctaaagaactt
ataccagataaagaatcatatagcttaggtaaattggtacgctcactaggcatacctgtt
agtgacagacacagagctaatggagatgcacttgctacattacaattgtttaaactattg
cttgctaaagactctaacaaaagcattattaaaactgttataaaagaaggttctatggga
gaactttcagacagacaaataaatcttgtagaacaattacctaatgatactggagtttat
tatatgtatgataaagatggtgatttaatttttttggggagatctacagatattaagaaa
aaagtaaacaaacactttacaggcgtttctaatgttgctaaaaaactacaaaagcaaaca
cgtaaggttacatttgaaaaaacaggaaacgacctaattgctactctaaaagaaaacgaa
gaattacgcagagttaaaccaaaatacaatagtagcatacgtaaaaaactatttaattat
ggtgtttttataaaagaaaataaagatggctacttgtctttatttattgataaaactaca
actacagaccaaacaataggtacttttagcagttacattgctgctaaaaattttgttcat
aaaaccaccaaagagtttacactttgcaacaaggtaaattatatttctgaagcaaaaact
aactgtggaaattatgaagatggtacatgtaatggtgcctgtataaaaaaagaagccaca
gaagtttacaacgctagggtaaaacaggtaattgaaacatatagcctagccggaaaaaat
atattaataaaagacaaaggcagagaaataggtgaatattctgctattttaattaaaaat
ggagaatttaaaggctatggatattacaatttaaatcatcaaataaataatattcatatc
ttagaatctattattaccaatatgaaaagtacccaaaacaccattcacctaattttaacc
tatcttagaaaaaataaaagagtacaacaaatacaactacactaa
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