Chlorobium limicola: Clim_0012
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Entry
Clim_0012 CDS
T00766
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
cli
Chlorobium limicola
Pathway
cli02024
Quorum sensing
cli03060
Protein export
cli03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Clim_0012
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Clim_0012
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clim_0012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cli02044
]
Clim_0012
Secretion system [BR:
cli02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Clim_0012
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
ACD89120
UniProt:
B3EDP0
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Position
13548..15371
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AA seq
607 aa
AA seq
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MKNKPFNLFLIVLVTVVSLWSLWPTWRDYSLSKQIDSFASGEDSLKFSVSHSEEIENARK
KSLKLGLDLRGGMHLVMEVDQIDLFEQKAWNKDARFHAIMERVRKLSANSNAQVIDLLSA
EFGKENIRLSRYFYDIRNSDREIIGKLQKESEDALTRAREIIRNRIDQYGVAEPVITTQG
SRRIIIELAGISDENRVRNLLKGTAKLEFKLLREPEVLLRVLDKLNSSLTAQSVVSALPA
VADTAGVLPPASAAASKSAGPLYDVLTIMQNGNVYVPAESREFVVKLFQRSDIKALIPQD
SELLLAAKPDQLQDGRNYYPVFLLRKTAELTGGVITEAKASFSAEGAQPEVLMEMNSEGT
AKWARITGANIGKRVAIVLDGAVYSAPVVQSKIPNGNSVINGIESVEEAKDLEIVLKAGA
LPAPVRIIEERTVGPSLGADYIRAGMLSLLWGFLAVSVFMLLYYHTAGIAADMALVLNIL
VVLSVLAGFNASLSLPGIAGIVLTMGMAVDANVLIYERIREELADGKSIVSAVAAGYDKA
FSSILDSHVTTLASAYLLYTFGIGPIQGFAVTLMIGTAASLFTAIVVTKEIFNFMLSKNM
LSEKSFG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaacccttcaatctttttctgattgttctggtaacggttgtgtctctatgg
tcactgtggccaacatggcgtgattactcgttatcgaaacagatagacagttttgcctca
ggtgaagacagcctgaaattcagcgtcagccatagtgaagaaattgaaaatgcacgtaaa
aaaagcctcaagcttggtctcgatctcagaggtggtatgcatcttgtcatggaagtcgat
cagatagatcttttcgaacagaaagcatggaacaaggatgcgcgttttcatgctataatg
gaaagagtccgcaagctgtccgcaaacagtaatgcacaggttatcgatctcctttccgcg
gaattcggaaaggagaacatcaggctgagccgttatttctacgatatacggaacagcgac
agggaaataatcggcaagctgcaaaaagagtcggaagatgctctcaccagggcaagggag
atcattcgcaaccgtatagatcagtacggagttgccgaaccggtgataaccacacagggc
agtcgccgcatcattatcgagcttgccggcatatccgatgaaaatcgggtgagaaatctg
ctcaaaggtacggcaaaacttgaatttaaactgttgcgggaaccggaggttctgctgcgg
gtactcgacaaactcaactcgtcccttactgcgcaaagcgtcgtttccgcccttcctgct
gtcgccgatacggccggtgtgctcccgccagcttctgctgcggcgtccaaatcggccggc
ccgctgtatgatgtacttaccattatgcagaacggtaacgtgtatgttcctgccgaatca
agggagtttgtcgtcaagctgtttcagagaagcgatatcaaggcgcttatccctcaggac
agcgagctgctccttgcggcaaaacctgatcagcttcaggacgggcgtaattactatcct
gtttttctgctcaggaaaacagctgaattgacgggcggggtcatcaccgaagccaaagcc
tctttcagtgccgaaggtgctcagccggaggtactcatggaaatgaactccgaaggtact
gcaaagtgggcccgaataacaggagccaatatcggcaaacgggtagccattgtgcttgac
ggtgcggtttacagcgctccggtagttcagtcgaaaattccaaacgggaactcagttatc
aatggcatcgagagcgttgaagaggctaaagaccttgaaatcgttctcaaagccggcgct
ctgcccgcaccggtcagaatcatcgaagagcgcactgtgggaccctcacttggagccgat
tatatcagggcggggatgctctctttgctatggggttttctggctgtgtcggttttcatg
ctgttgtactatcatacagccggtatcgcagccgatatggctctggtcctgaacatcctg
gtcgtgctttccgtgcttgcgggattcaatgcctcactctcgcttccgggtattgccgga
attgtgttgaccatgggtatggccgtcgacgcaaacgtgctgatatatgagcggatcaga
gaggaactcgccgatgggaagtcgattgtttcggcggttgctgccggatacgacaaggcg
ttctcatccattctcgactcgcatgtcacaacgctggcgtcggcatatctgctctacacc
ttcggaatcggtccgattcagggctttgccgttacccttatgatcggtacggcggcaagc
ctgtttaccgctattgtcgtgacgaaggagattttcaattttatgctttcgaaaaacatg
ctttcagaaaagagtttcggttaa
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