| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cli00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clim_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cli03019]
Clim_0041
03400 DNA repair and recombination proteins [BR:cli03400]
Clim_0041
Enzymes [BR:cli01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clim_0041
Messenger RNA biogenesis [BR:cli03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Clim_0041
DNA repair and recombination proteins [BR:cli03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Clim_0041
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(46674..48521)
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| AA seq |
615 aa
MQATGSDSALFDTLRKVFGFREFRPNQERIVRAILNKRDVFAVMPTGGGKSLCYQLPAVL
LPGTCMVISPLIALMKDQVDGARANGIRAAHLNSSLCPEERTAVMHDLLSNSLDLLYVAP
ERFTLEQFREMLGRVNISMAVIDEAHCISEWGHDFRPDYLSLSALVTLFPDLPVTAFTAT
ATHLVQQDILDKLSLRDPLVVRASFDRGNLFYDIRFKENSGEQIAAIVRSNQGKAGIIYR
TSRKNVNDTTAMLKAKGFRALPYHAGLGDEERKRNQDAFIRDEADVIVATVAFGMGIDKS
NIRFVIHADLPKSIENYYQETGRAGRDGEAAQCTLLFSQGDIPKVRFFIDTITDEAERAR
VLAAFSKVIAFASTSVCRRKTLLDYFGETYPHDNCNSCDICLGTREVIDATTESQMLLSA
IARTEERFGATHIVDIVTGSRNQKIRDFGHDRLKTYGVGKGREKKFWRQLIDELLARKVI
AKSEGLFPMLYLLPKAVQVLRNEEKVEIVRVREKKATGNVKNLVEGSYDHELFDLLRSLR
KQIADELGIPPYVVFSDRSLRDMASILPQSDETMLSVSGVGEVKLQRYGQQFLALIKKYR
KEHPEETSRLPILPR |
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| NT seq |
1848 nt +upstreamnt +downstreamnt
atgcaggcgaccggatcggattcagccttgttcgatacccttcgaaaggttttcggattc
cgtgagtttcgcccgaatcaggaacgcattgtacgggcaattctgaataagcgggatgtg
tttgccgttatgcccaccgggggcggcaaatctctctgctaccagctgcccgcagtgctg
cttccgggaacctgcatggtgatcagcccgcttatcgcgctcatgaaagatcaggttgac
ggagcgagggccaatggcatccgcgctgcgcatctcaacagctccctctgcccggaagaa
cgaactgccgttatgcacgacctgctctcgaattcgctcgacctgctctatgtggccccc
gaacgctttacgctcgagcagttccgggagatgctcggacgggtgaacatcagcatggcc
gtaatcgacgaagctcactgtatttcggagtggggacacgatttccggccggactatctc
tctctttccgctctggtcaccctctttcccgatctgccggttaccgcctttacggctacg
gccacgcacctggtgcagcaggatattctcgataaactctcactgcgcgatccgcttgtc
gtcagggcctcctttgaccgcggcaatcttttctacgacatccgtttcaaggaaaacagc
ggggaacagattgcggcgattgtgagaagcaatcagggaaaagccggaatcatctaccgc
accagccgtaaaaacgtcaacgacacgacggccatgcttaaagctaaagggttcagggca
ctcccctaccacgccgggttgggagacgaggagcgcaagcgcaatcaggatgccttcatc
cgcgatgaagcggacgttattgtcgccacggtcgcattcggtatggggatagataaatcg
aacatccgcttcgtcatccatgccgacctgccgaaaagcattgaaaattactatcaggaa
accggcagggccggacgcgacggcgaggctgcgcaatgcacgttgctgttctcgcaggga
gacatccccaaagtgcgcttcttcatcgacacgataaccgatgaagccgagagggcccgg
gttctcgccgcattttcaaaagttatcgcattcgcatccacatcggtctgcaggcggaaa
accctgcttgactatttcggtgaaacctacccacacgataactgcaactcctgtgacatc
tgcctcggcacacgagaggtcattgacgccaccactgagtcgcagatgctgctttcggca
atcgcccggactgaagaacggttcggagcgacgcatattgtggatattgtgaccggaagc
cggaaccagaaaatcagggacttcgggcatgaccggcttaaaacttacggagtgggaaag
ggacgcgaaaaaaaattctggcggcagctgatcgatgagcttcttgcccggaaagtgatc
gcgaaatccgagggcctcttccctatgctgtatctgctgccaaaagcggttcaggttctg
agaaacgaagaaaaagtcgaaatcgtcagagtaagggaaaagaaagcgaccggaaatgta
aagaatctggtggaggggagttacgatcatgaactgtttgatctgctccggtctctcagg
aaacagatcgccgacgaactgggtattccgccctatgtggtcttttccgaccgctcgctg
cgcgatatggcctccattctgccgcagagcgacgagaccatgctttcggtttcgggagtc
ggagaggtcaagcttcagcgatatggacaacagttcctcgcgctcataaaaaaatacaga
aaagagcatccggaagaaacttcccgattgccgatactgcctcgatga |
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