Chlorobium limicola: Clim_0272
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Entry
Clim_0272 CDS
T00766
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cli
Chlorobium limicola
Pathway
cli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clim_0272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cli02000
]
Clim_0272
Enzymes [BR:
cli01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Clim_0272
Transporters [BR:
cli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Clim_0272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND3
AAA_22
AAA_15
Zeta_toxin
DEAD
RsgA_GTPase
AAA_25
AAA_21
DUF87
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACD89367
UniProt:
B3EEY4
LinkDB
All DBs
Position
308490..310394
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AA seq
634 aa
AA seq
DB search
MKLIFRVLAYLSPSKGKVLLVFFVSILTSIFSVVSIYSVLPLLNEIFTADKPVVHVQSGS
ISQHEKPDGLTEKTSVVSRESLVDTEALQQRAKDVMARLFHADTKQQTLLNICLFLIAAF
AFKNFFLYLNKQIIFRIQTKATKQLRDDVFRSIIEMHLDYFNNQRVGSLMNNVYGDVQTV
QTSISSTFINLIQNPFTIFVYLGVLLVLSWKLTLFALVVSGIVFIIIRVIGRRVRTLSRI
FRKRMGDMNSVLQERFNGIKVIKSSGFEDVETERFKVFTSDFRRLDLKIFRLKNIIGPLN
ETLLVFAVAMVLWFGGLQVFDGRMTANELIVFAFSLYSAMGPLKTLGEANTNIQNGMASA
ERLFEVIDAEPIVINGTRSISVFSGSIRFEDVCFKYRKEPEAPNILDHVTFEIRMGEMVA
LVGQSGSGKSTAVDLLLRFYDVDSGRITIDGIDIREFDYKQLRRMIGVVSQEVILFNDTI
GQNIAYGVHQEVAPEQVEAAARLANAHAFIIEKPLQYDTVIGDRGIQLSGGQRQRIAIAR
AMVKNPYLLIFDEATSALDNESEKVVQEAINNALQNRTALVVAHRLSTIRNADRIIVFDK
GRVAETGTHDELLAGNGLYKIYYDIQFGEKNDRV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttttcgagtacttgcctatctctccccttccaaaggcaaggttctgctt
gttttttttgtcagcattctcacctcgattttcagcgtcgtatccatatactcggtactt
ccgctgctcaatgagatattcactgccgataaacctgtcgttcatgttcagtcaggttcg
atttcgcaacatgaaaaacctgatgggctgacggagaagacttcagtcgtttccagagaa
agtcttgtcgatacggaggctcttcagcagcgggcaaaagatgttatggcgcgtttgttc
catgcggatacaaagcagcagacattgctcaatatctgtctttttctcatagctgctttt
gccttcaagaactttttcctttatctcaacaagcagataattttcaggatacagaccaag
gcaaccaagcagcttagggacgatgtcttccgctcgatcatcgagatgcatctcgactat
ttcaacaaccagcgggtcggaagtctcatgaacaatgtttatggcgatgttcagaccgta
cagacatcaatcagctcgacattcatcaacctcatacagaatccttttaccatattcgtc
tatctcggtgttctgcttgtactgagctggaagctgaccctgtttgctcttgtcgtttcg
gggatcgtctttattatcatcagggtgataggccggagggtaagaacgctatcgagaatt
ttccgtaaacgcatgggggatatgaactcagttctccaggaacggttcaatggcatcaag
gtcatcaagtcaagcggtttcgaggatgttgagaccgagcgcttcaaggtttttacgagc
gatttccgccggctcgacctcaaaatattccgtcttaagaatattatcgggccgctcaac
gaaacgctgcttgttttcgctgtcgccatggtgctctggttcggcggattgcaggtattc
gacggacgcatgactgccaatgagttgattgtattcgctttcagcctctactctgccatg
ggccctctcaagacgcttggggaggccaataccaacatccagaacggtatggcttctgcc
gaaaggttgttcgaggttatcgatgccgaaccgatcgttataaacggaacccgatccatc
agcgtattttccggcagtatcaggtttgaggatgtctgttttaaataccgcaaagagccg
gaagccccaaatattctcgatcatgtaacctttgaaatccggatgggtgaaatggtcgca
cttgtcgggcagtcaggttccggcaaatccacagcggttgatctgctgctgcgtttctat
gacgtcgattcagggcgtattaccattgacggcatagatatcagggagttcgattacaag
cagctccgtcgcatgatcggcgtagtgagccaggaagtcattctcttcaacgataccata
gggcagaacatcgcatacggcgtgcatcaagaggtcgctcccgaacaggtcgaggcagca
gccaggcttgccaatgctcacgccttcattattgaaaaaccgcttcagtacgataccgtt
atcggcgaccgcggcatccagctttcaggggggcagcgtcagcgtatcgctatagccagg
gctatggtgaaaaatccctaccttctcattttcgatgaggcaacaagtgccctggacaat
gaatcggaaaaagtggtacaggaagcgatcaataacgccttacagaacaggactgcgctt
gttgtcgctcatcggctttctaccatcagaaatgccgatcggattattgtatttgacaaa
ggtcgggtagcagaaacaggaactcacgatgagctgttggccggaaatgggttgtacaag
atttattacgatatccagtttggggagaaaaatgacagggtttga
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