Chlorobium limicola: Clim_0349
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Entry
Clim_0349 CDS
T00766
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
cli
Chlorobium limicola
Pathway
cli03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Clim_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cli03011
]
Clim_0349
Ribosome [BR:
cli03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Clim_0349
Bacteria
Clim_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
DUF2110
PCB_OB
MRP-S35
DRTGG
Propeptide_C25
Motif
Other DBs
NCBI-ProteinID:
ACD89442
UniProt:
B3EFF9
LinkDB
All DBs
Position
385593..387353
Genome browser
AA seq
586 aa
AA seq
DB search
MPETLSLEKKVQERPARKKVKVFAHYDSAALAEMEKLYTSTLSEIREDEIVKGRIVSISN
KDVTIDVGYKSEGIVSLLEFRDEEEGEVKVGDEVEVYLENIEDKMGQLILSKKKADVLRI
WDKIYDSIENDTIINGKIINRVKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDF
RVVKINPVTQNIVVSHKVILEEEYAARREEMLANIKVGMVLEGTVKNITDFGIFVDLGGL
DGLVHITDITWGRINHPSEVVELDQPIKVVVVGFDENTKRVSLGMKQLESHPWENIELKY
PVGSKANGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILN
IDKEHTKLSLSMKRVNEDPWIALSEKYIENSLHKGTVSNITDFGVFVELEAGVDGLVHIS
DLSWTKKIRHPSELVKKNQELEVKVLKFDVNARRIALGHKQINPDPWDEFEQKYAVGAET
PGNISQIIEKGVIVILPGDVDGFVPVSHLLQGGVKDIHSSFAVDNELPLRVIEFDKENKR
IILSALEYFKDKSKEEIEAYLQAHPNEKKEIEDATAELEPQPKGSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaacactatcgctggagaagaaagtccaggaaaggcccgcaaggaaaaaagtc
aaagttttcgctcactacgattccgcggcacttgccgagatggaaaagctctatacgagt
acgctgagcgaaatcagggaagacgagatcgtcaagggccgtatcgtctccatttccaac
aaggacgtcaccattgacgtcggttacaagtcagagggtattgtctcactgcttgaattc
cgtgacgaagaagagggagaagtcaaggttggcgatgaagtagaggtttatctcgaaaac
atcgaagacaaaatggggcagctcattctttccaagaagaaagctgacgttctgagaatc
tgggacaagatctacgattcaattgaaaacgacacgatcatcaacggcaagatcatcaac
cgcgtcaagggcggtatgactgtctccctgtccggtgttgaagccttccttcccggttcg
cagatcgatgtcaagcctgttcgtgatttcgatgccctggtcggtcagactatggatttc
agggttgtcaaaatcaatcccgttactcagaatattgttgtcagtcacaaggtcatcctc
gaagaggagtatgcagcacgccgtgaagagatgcttgccaatatcaaggttggtatggtg
ctcgaaggtacggtcaaaaatatcaccgacttcggtatttttgtcgatcttggcggtctc
gacggtctggtgcatatcaccgatattacctggggcagaatcaaccatccgtcggaagtc
gtcgaacttgatcagccgatcaaggttgttgttgtcggcttcgatgagaacaccaagcgt
gtctctctcggcatgaagcagcttgagtctcatccgtgggaaaacatcgaacttaaatat
cctgtcggatccaaagcgaacggccgtgtggtttccattaccgattacggcgcatttgtc
gagatcgagaaaggtattgagggacttgtccacatttccgaaatgagctggacgcagcac
atcaaacatccgggtcagttcgttactctcggtcaggaggttgagtgtgtgattctcaat
atcgataaagagcacaccaagctttcgctctccatgaaacgggtgaacgaagacccctgg
atcgcgctttcagaaaaatatatcgagaattcattgcataaaggcacggtcagcaacatc
accgattttggtgtatttgttgagcttgaagccggagttgacggtctggtgcacatctcc
gatctgtcatggacgaagaaaatccgccatccgagcgaactggtcaagaaaaaccaggaa
ctggaagtcaaggtgctgaaatttgacgtcaatgctcgccgtatcgctctcggtcacaag
cagatcaatcctgatccgtgggatgagttcgagcagaagtatgccgtaggcgccgaaact
ccgggaaatatctcacagatcatcgagaagggtgtcattgtcattctgcccggcgatgtt
gacggttttgtgccggtatcgcatctgcttcagggcggcgtgaaggatattcactcctcg
ttcgctgtggataatgaacttccgcttcgcgtgatcgagttcgacaaagagaacaaaagg
atcattctttcggctctcgaatatttcaaggacaagagcaaggaggagatcgaagcatat
cttcaggctcatccgaacgaaaagaaagagatcgaggatgctaccgcagagctggagcct
cagccgaaaggcagcaagtaa
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