KEGG   Chlorobium limicola: Clim_0349
Entry
Clim_0349         CDS       T00766                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
cli  Chlorobium limicola
Pathway
cli03010  Ribosome
Brite
KEGG Orthology (KO) [BR:cli00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Clim_0349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cli03011]
    Clim_0349
Ribosome [BR:cli03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Clim_0349
  Bacteria
    Clim_0349
SSDB
Motif
Pfam: S1 S1_2 Spt6_S1 DUF2110 PCB_OB MRP-S35 DRTGG Propeptide_C25
Other DBs
NCBI-ProteinID: ACD89442
UniProt: B3EFF9
LinkDB
Position
385593..387353
AA seq 586 aa
MPETLSLEKKVQERPARKKVKVFAHYDSAALAEMEKLYTSTLSEIREDEIVKGRIVSISN
KDVTIDVGYKSEGIVSLLEFRDEEEGEVKVGDEVEVYLENIEDKMGQLILSKKKADVLRI
WDKIYDSIENDTIINGKIINRVKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDF
RVVKINPVTQNIVVSHKVILEEEYAARREEMLANIKVGMVLEGTVKNITDFGIFVDLGGL
DGLVHITDITWGRINHPSEVVELDQPIKVVVVGFDENTKRVSLGMKQLESHPWENIELKY
PVGSKANGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILN
IDKEHTKLSLSMKRVNEDPWIALSEKYIENSLHKGTVSNITDFGVFVELEAGVDGLVHIS
DLSWTKKIRHPSELVKKNQELEVKVLKFDVNARRIALGHKQINPDPWDEFEQKYAVGAET
PGNISQIIEKGVIVILPGDVDGFVPVSHLLQGGVKDIHSSFAVDNELPLRVIEFDKENKR
IILSALEYFKDKSKEEIEAYLQAHPNEKKEIEDATAELEPQPKGSK
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgccagaaacactatcgctggagaagaaagtccaggaaaggcccgcaaggaaaaaagtc
aaagttttcgctcactacgattccgcggcacttgccgagatggaaaagctctatacgagt
acgctgagcgaaatcagggaagacgagatcgtcaagggccgtatcgtctccatttccaac
aaggacgtcaccattgacgtcggttacaagtcagagggtattgtctcactgcttgaattc
cgtgacgaagaagagggagaagtcaaggttggcgatgaagtagaggtttatctcgaaaac
atcgaagacaaaatggggcagctcattctttccaagaagaaagctgacgttctgagaatc
tgggacaagatctacgattcaattgaaaacgacacgatcatcaacggcaagatcatcaac
cgcgtcaagggcggtatgactgtctccctgtccggtgttgaagccttccttcccggttcg
cagatcgatgtcaagcctgttcgtgatttcgatgccctggtcggtcagactatggatttc
agggttgtcaaaatcaatcccgttactcagaatattgttgtcagtcacaaggtcatcctc
gaagaggagtatgcagcacgccgtgaagagatgcttgccaatatcaaggttggtatggtg
ctcgaaggtacggtcaaaaatatcaccgacttcggtatttttgtcgatcttggcggtctc
gacggtctggtgcatatcaccgatattacctggggcagaatcaaccatccgtcggaagtc
gtcgaacttgatcagccgatcaaggttgttgttgtcggcttcgatgagaacaccaagcgt
gtctctctcggcatgaagcagcttgagtctcatccgtgggaaaacatcgaacttaaatat
cctgtcggatccaaagcgaacggccgtgtggtttccattaccgattacggcgcatttgtc
gagatcgagaaaggtattgagggacttgtccacatttccgaaatgagctggacgcagcac
atcaaacatccgggtcagttcgttactctcggtcaggaggttgagtgtgtgattctcaat
atcgataaagagcacaccaagctttcgctctccatgaaacgggtgaacgaagacccctgg
atcgcgctttcagaaaaatatatcgagaattcattgcataaaggcacggtcagcaacatc
accgattttggtgtatttgttgagcttgaagccggagttgacggtctggtgcacatctcc
gatctgtcatggacgaagaaaatccgccatccgagcgaactggtcaagaaaaaccaggaa
ctggaagtcaaggtgctgaaatttgacgtcaatgctcgccgtatcgctctcggtcacaag
cagatcaatcctgatccgtgggatgagttcgagcagaagtatgccgtaggcgccgaaact
ccgggaaatatctcacagatcatcgagaagggtgtcattgtcattctgcccggcgatgtt
gacggttttgtgccggtatcgcatctgcttcagggcggcgtgaaggatattcactcctcg
ttcgctgtggataatgaacttccgcttcgcgtgatcgagttcgacaaagagaacaaaagg
atcattctttcggctctcgaatatttcaaggacaagagcaaggaggagatcgaagcatat
cttcaggctcatccgaacgaaaagaaagagatcgaggatgctaccgcagagctggagcct
cagccgaaaggcagcaagtaa

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